Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1349 ATGGCTTCTTCTGTTTATGAAGATGATTTTGGCTTTGGCTTTGGCTTTGATGAAGGAATGCTACGATGCTTGCCCTCCAATGTTGTCGATGAGGCATGCCTCCGTACATATGAGGCACTGCCACCAAAATCATCATCAACTGCGTCGCCACAAATCTTCAGTACAACCTCAGGCTTCGCAAAAGCAAAATTCAATGTGTTATTGGTTAACACAAAGAATATGCCTTTGCATTTAGGTATGCAAGCTGCAATACAGCAAAGCTTAAACCTAAACAATTATACACACACACAAGTCTCAGTGGCTTACAGACAATTTCCTTTTGAGCAGTACTCAAGATCATCGCATCAAAGGCCGAAACTAGCCAATGGTGGATATGGAATGCAAGCGATTTTCCTGGAATCTGGGCCGAGATCGTGTGGAACAGGTGTATTCTTACCCCAAACAGCAGGCACAAACTTCCAAACTCGCAAGAAGAAGCCAGGCTGTGCTCCTGTGCTGCTCCCAAACCGAGTGATTCGAGCTCTAAATCTCAACGTTCACACGTTAGGCTTGCAAATTTCACCTCTCCAAGGCAGACAAGCAGAACAAATACAATTTTACTGTATAAAGTTCCATAAAACTGGGGTTTCTGGATTTGAAAGAAGGCAATCTCTATTGTTGAATGGGTCTTTGTTTGATAGAGTAAATCGGAAGCATTATGTTAACGTCACTGATAAGCGTCGAGGTGACTATTTGCATGTGGAACCTCCAAATATCCTTCATTCAAGTCAGGAAATTGTTCCACCAACTCAAAGTGATGGGGCAGAAATTCTTGTATCTCCTGCTTCCAATAACTTCAGAAACCTAGACTTGAGACCCAAAAAGTATAAAAATAGGTTTCTTAATTTTGTCCGTTGGAGTCCTGTCCTGAACGGAATTGCGGAATCATTTTTCCAAAGTGAGATACGGAGGAGGTTATTTGTGACTGCCGTACTAATTGTACTCAGTCGTGTTGGCTATTTTGTTCCTCTACCTGGCTTTGATAGGAGGTTGATACCACAAGACTACCTGAGCTTTGTCTCAGGATCTGTTGATGAACTTGGTGACTACACCTCTGAGCTCAAACTTTCTCTTTTCCAGCTTGGAATCAGTCCTCAGATTATAGCATCCATTATTATGCAGGTTCTTTGTCATATGGTTCCTACTCTAGTGAAACTGCGAAAGGAAGGTTTAGATGGACAAGAGAAGATAAAGAATTATATATGGTGGATGTCACTTGGCTTTGCAATTTTGGAAGCTCTAATACTTGCTTGCTACTCACTTCCATATTCAATTTATGCTGTCAATCAAAGGGTCAAGCATGTGATGGTGACAACTCTTTTGTTGGTGTGCGGTGCAATGACTATTACATGGATATGTGATACCATCTCAGAATCCGGCTTTGGTCAAGGTTCATCACTTATTGTATGTGTGGGGATATTGACGGGTTATAGGGAGACCCTACACAAAATGCTGACTCAGCTCTCAGTGAGTGCTGTGAGTTGGTGGTCCTATGTCCTTGCAGTGTTGGGTCTATTTACAATTGTCACTATGTGGGCAGTTGTAGTCACTGAAGGTTGCAGGAAAGTGAAACTTCAATACTATGGATTCAAACTTGCTTCTGCTGCAAGAGAGCAATCCCCAATTACTGAAGTGGAGCCCTATATTCCTTTCAACATCAATCCGTCAGGAATGCAACCTATTCTTACCACCTCTTACCTCATGGCATTTCCAAGCATTCTTGCAGGTTTGCTCGGTTCACGTTTCTGGGAGCATGTCAAGGAGATATTGAACCCCGAAACATCTGCTGGTGCTGAGCCATGGGTTTACTACTTCATCTATGCTTTCTTTGTCTTCTTATTCAATATATTTGATATTGCCAACTTGCCCAAGGAAATTGCTGATTACTTGAATAAGATGGGTGCTAGGATACCTAACATAAAGCCTGGGAAGGCTACAATAGAATACCTTTCGAAAGTTCAGGCATCCACACGATTCTGGGGGGGACTATTGTTAAGTGTACTGGCAACCACATCAAGTATTCTTGATCATTATTTACGGCGTACTAATGCTGGATTTGCAATTGGGTTTACATCAGTTTTGATTATTGTTGGCTCCATTATTGAGCTTAGAAGATCGTATCAAGCCTATAATGTAATGCCAAGTTTAAGCAAGGCCCTGAGACGGTATGGCGTATAG 2217 0.4199 MASSVYEDDFGFGFGFDEGMLRCLPSNVVDEACLRTYEALPPKSSSTASPQIFSTTSGFAKAKFNVLLVNTKNMPLHLGMQAAIQQSLNLNNYTHTQVSVAYRQFPFEQYSRSSHQRPKLANGGYGMQAIFLESGPRSCGTGVFLPQTAGTNFQTRKKKPGCAPVLLPNRVIRALNLNVHTLGLQISPLQGRQAEQIQFYCIKFHKTGVSGFERRQSLLLNGSLFDRVNRKHYVNVTDKRRGDYLHVEPPNILHSSQEIVPPTQSDGAEILVSPASNNFRNLDLRPKKYKNRFLNFVRWSPVLNGIAESFFQSEIRRRLFVTAVLIVLSRVGYFVPLPGFDRRLIPQDYLSFVSGSVDELGDYTSELKLSLFQLGISPQIIASIIMQVLCHMVPTLVKLRKEGLDGQEKIKNYIWWMSLGFAILEALILACYSLPYSIYAVNQRVKHVMVTTLLLVCGAMTITWICDTISESGFGQGSSLIVCVGILTGYRETLHKMLTQLSVSAVSWWSYVLAVLGLFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPSGMQPILTTSYLMAFPSILAGLLGSRFWEHVKEILNPETSAGAEPWVYYFIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPGKATIEYLSKVQASTRFWGGLLLSVLATTSSILDHYLRRTNAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRYGV 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1349 738 FunFam Preprotein translocase subunit SCY2, chloroplastic 303 728 - -
Lele06g1349 738 Gene3D SecY subunit domain 302 728 IPR023201 -
Lele06g1349 738 PRINTS Preprotein translocase SecY subunit signature 319 337 - -
Lele06g1349 738 PRINTS Preprotein translocase SecY subunit signature 445 470 - -
Lele06g1349 738 PRINTS Preprotein translocase SecY subunit signature 614 636 - -
Lele06g1349 738 PRINTS Preprotein translocase SecY subunit signature 471 494 - -
Lele06g1349 738 PRINTS Preprotein translocase SecY subunit signature 410 433 - -
Lele06g1349 738 PRINTS Preprotein translocase SecY subunit signature 369 389 - -
Lele06g1349 738 PRINTS Preprotein translocase SecY subunit signature 569 588 - -
Lele06g1349 738 PRINTS Preprotein translocase SecY subunit signature 702 720 - -
Lele06g1349 738 Pfam SecY 370 716 IPR002208 GO:0015031|GO:0016020
Lele06g1349 738 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 311 726 IPR002208 GO:0015031|GO:0016020
Lele06g1349 738 SUPERFAMILY Preprotein translocase SecY subunit 299 723 IPR023201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1349 Lele-ChrLele06 8634238 8643938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1349 227 738 Miscellaneous Gene Families AT2G31530 72.937 0.0 780
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1349 06 8634238 8643938 Lele06g1349 06 8634238 8643938 ECH
Lele06g1349 06 8634238 8643938 Lele07g1554 07 9577754 9584319 hybridization
Lele06g1349 06 8634238 8643938 Lele08g1344 08 8586930 8593034 hybridization