Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1331 ATGTCTTCCCTTTTCCCTCTCTCTCCTCTCCCTTCTTCTTCTCTCTCTTTGCCTTCTTCTTCTCTCTCTTTGCCTTCTTCCTCCTCCAAATCTCCCCTCCTCCTCGAATTCGCTGACATATTTCAGGGTGGTCTTCCAACGTTCAAGTGGCGTGAAATTGTGCAGGATGATATCCACGAGGAGGAAGCTCATAAGGTTCCGGTGAGCAGTGAGATCAAAAAGCGAGTGGAAGCTATCAGACGGATATTGGGTTCCATGGATGATGGTGACATCAGCATATCTGCATACGACACAGCATGGGTTGCTCTTGTTCAAGATGTTAATGGAAGTGGTGTCCCACAATTCCCTTCCAGTCTCGAATGGATAGTGAACAACCAGCTTCCCGATGGTTCATGGGGAGATAAACAAGTTTTCTCCGCTCACGATCGAATCATCAACACGTTGGCTTGTGTTATTGCATTAAAAACATGGAATATCCATCCTGAAAAGTGCCACAAAGGGCTGGCATTTTTCAGAGAAAACATCAGCAAGCTTGAGGATGAGAATGCTGAGCATATGCCAATCGGTTTTGAAGTTGCTTTCCCTTCTCTTCTGGATATAGCTCGTGATCTGAGCATTCAAGTACCGGATGATTCTCCAGTCCTGAAAAAAATCTTGGCCATGAGAAATGTAAAGCTGACCAGAATACCAAGAGAGATGATGCATAAAGTGCCCACAACACTGCTTCATAGCTTGGAGGGCATGTCAGGATTGGATTGGAAGCAGCTTCTAAAATTGCAGTGTAAAGATGGCTCTTTCTTGTTTTCTCCCTCCTCCACTGCCTTTGCTCTTATGCAGACTCATGACCAAAATTGCCTCAATTACTTGAATAAAGTAATCACCAACTTCAATGGTGGAGTTCCAAACGTGTACCCAGTGGATTTGTTCGAATATATTTGGGTCGTTGATCGTTTGGAGCGCCTTGGAATTTCCAGATATTTTAAGCAAGAGGTGGAGGACTGTGTCAGCTATGTTCATAGATATTGGACCGATAAGGGAATTTGTTGGGCGAGAAATTCAAATATTCAGGATATTGATGACACAGCAATGGGATTCAGAATGCTAAGATTACATGGCCGTGAAATTTCAGCCAATGTGTTTAAGAACTTTGAGAGAAATGGTGAGTTCTTCTGCATTGCTGGGCAGTCAACACAAGCAGTGACAGGAATGTTCAATCTGTATAGGGCAAGTCAAGTAGGGTTTCAAGGAGAGAAGATTCTGGAAGATGCAAAGAAGTTCTCAGTCAAATTTCTGAGAGAGAAAAGAGCAGCAAATGAGCTCATAGATAAATGGATCATCGTGAAGAACTTACCCGGAGAGGTGGCTTATGCATTGGACGTGCCATGGTATGCAAGCTTACCTCAAATAGAGACAAGGTTTTATATTGATCAATATGGCGGTGACACTGACGTCTGGATTGGCAAAACTCTTTATAGGATGGGGAAGGTGAGTAATAACACTTATCTTGAGCTAGCAAAGTTAGATTACAACAATGGCCAAGAATTGCATCAGACAGAATGGAGCAATATTCAACAGTGGTGCTCAGAATGCAGATTGGGAGAGTTTGGATTGAACAGAAGATCTCTTCTGATAGCTTATTTTGTGGCAGCATGCAGCATATTTGAGGCCGAAAGGTCTCTAGAGAGAATTGCATGGGCCAAAACAGTGGCCTTGCTCAACACCATTACAGCTTATGTTACTGATGAAGAAATGAGGAATGCTTTTGTTGACAAATTCAACCACTACATCAATGGAGGAGGAGACTTCTCTATTGGCTGGAGGTTGAATGGGTACACAGGGCAGGGACTGGTGGATGCTTTGGTTGGAACCATTGATCAACTCTCTTTGGAAACTCTTCTATCTCATGGTCATAAAATTGGCCTTGACATGCAACAAAGTTGGCAGAAGTGGCTTTCAAATTGGCATGGTGGAGGAGACAAGAGGGAAGGACAAGCAGAGCTTTTGGTGCAAATAATTAACCTTAGCGCAGGCCACAGAATACCAGAGGAACTACTGTTCAACCATCAATACCAGAATCTACTTCAGCTCACAAACATTGTTTGTTACAGACTCCAATGCCATCAAAAGGACAAGGCCCACGAGAATGGAAGTTGCAGTATGAAGTACAGCATCAGCACCACAGAAACAGAGGCAAAGATGCAAGAACTTGTGCAAGTGGTGCTTCAGAAATCTTCTAGTGACATTGATTCCAATATCAAGAACACTTTCCTTACAGTAGCCAAAAGTTTTTACTACGAAGCTTTCTGTGATGAAAGAACTATCGACTTCCACATTGCCAAAGTTCTCTTTGACAAAGTCATTTAA 2364 0.4298 MSSLFPLSPLPSSSLSLPSSSLSLPSSSSKSPLLLEFADIFQGGLPTFKWREIVQDDIHEEEAHKVPVSSEIKKRVEAIRRILGSMDDGDISISAYDTAWVALVQDVNGSGVPQFPSSLEWIVNNQLPDGSWGDKQVFSAHDRIINTLACVIALKTWNIHPEKCHKGLAFFRENISKLEDENAEHMPIGFEVAFPSLLDIARDLSIQVPDDSPVLKKILAMRNVKLTRIPREMMHKVPTTLLHSLEGMSGLDWKQLLKLQCKDGSFLFSPSSTAFALMQTHDQNCLNYLNKVITNFNGGVPNVYPVDLFEYIWVVDRLERLGISRYFKQEVEDCVSYVHRYWTDKGICWARNSNIQDIDDTAMGFRMLRLHGREISANVFKNFERNGEFFCIAGQSTQAVTGMFNLYRASQVGFQGEKILEDAKKFSVKFLREKRAANELIDKWIIVKNLPGEVAYALDVPWYASLPQIETRFYIDQYGGDTDVWIGKTLYRMGKVSNNTYLELAKLDYNNGQELHQTEWSNIQQWCSECRLGEFGLNRRSLLIAYFVAACSIFEAERSLERIAWAKTVALLNTITAYVTDEEMRNAFVDKFNHYINGGGDFSIGWRLNGYTGQGLVDALVGTIDQLSLETLLSHGHKIGLDMQQSWQKWLSNWHGGGDKREGQAELLVQIINLSAGHRIPEELLFNHQYQNLLQLTNIVCYRLQCHQKDKAHENGSCSMKYSISTTETEAKMQELVQVVLQKSSSDIDSNIKNTFLTVAKSFYYEAFCDERTIDFHIAKVLFDKVI 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1331 787 FunFam Ent-copalyl diphosphate synthase, chloroplastic 284 509 - -
Lele08g1331 787 Gene3D Farnesyl Diphosphate Synthase 512 787 IPR008949 -
Lele08g1331 787 SUPERFAMILY Terpenoid synthases 498 766 IPR008949 -
Lele08g1331 787 MobiDBLite consensus disorder prediction 1 25 - -
Lele08g1331 787 Gene3D - 78 510 IPR036965 GO:0010333|GO:0016829
Lele08g1331 787 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 95 278 IPR008930 -
Lele08g1331 787 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 65 492 - -
Lele08g1331 787 Gene3D - 95 307 - -
Lele08g1331 787 FunFam Ent-copalyl diphosphate synthase 95 307 - -
Lele08g1331 787 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 69 784 - -
Lele08g1331 787 Pfam Terpene synthase, N-terminal domain 252 458 IPR001906 GO:0010333|GO:0016829
Lele08g1331 787 SFLD Terpene Cyclase Like 1 N-term 65 492 - -
Lele08g1331 787 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 262 482 IPR008930 -
Lele08g1331 787 Pfam Terpene synthase family, metal binding domain 502 653 IPR005630 GO:0000287|GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1331 Lele-ChrLele08 8487338 8492375 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1331 08 8487338 8492375 Lele08g1331 08 8487338 8492375 ECH
Lele05g1480 05 9476011 9481945 Lele08g1331 08 8487338 8492375 hybridization
Lele06g1336 06 8545923 8550929 Lele08g1331 08 8487338 8492375 hybridization