Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1480 ATGAGTGCCTTTTGCTGTGCAGAATTCGCTGACATATTTCAGGGTGGTTTTCCAACGTTCAAGTGGCCTGAAATTGTGCAGGATGGCATCCACGAGGAGGAAGCGCATAAGACTTCGGTGAGCAATGAGATCAAAAAGCGAGTGGAAGCTATCAGACGGATATTGGGTTCCATGGATGATGGCGACATCAACATATCTGCTTACGACACAGCGTGGGTTGCTCTTGTTCAAGATGTTAATAGAAGTGGTGTCCCACAATTCCCTTCCAGTCTCGAATGGATAGTGAACAACCAGCTTCCCGATGGTTCATGGGGTGATAAACAAGTTTTCTCTGCTCACGATAGAATCATCAACACGTTAGCTTGTGTTATTGCATTAAAAACATGGAATATCCATCCTGAAAAGTGCCACAAAGGGCTGGCATTTTTCAGAGAAAACATCAGCAAGCTTGGGGATGAGAATGCTGAGCATATGCCAATCGGTTTTGAAGTTGCTTTCCCTTCACTTCTGGATATAGCTCGTGATCTGAACATTCAAGTACCGGATGATTCTCCAGTCCTGAAACAAATCTTGGCCATGAGAAATGTAAAGCTGACAAGAATACCAAGAGAGATGATGCATAAAGTGCCAACAACACTGCTTCATAGCTTGGAGGGCATGTCAGGATTGGATTGGAAGCAGCTTCTAAAATTGCAGTGTCAAGATGGCTCTTTCTTGTTTTCTCCCTCCTCCACTGCCTTTGCTCTTATGCAGACTCACAACCAAAATTGCCTCAATTACTTGAATAAAGTAATCACCAAGTTCAATGGTGGAGTTCCAAACGTGTACCCAGTGGATTTGTTCGAACATATTTGGATCGTTGATCGGCTAGAGCGCCTTGGAATATCCAGATATTTTAAGCAAGAGGTGGAGGAGTGTGTCAGCTATGTTCATAGATATTGGACCGAGAAGGGCATTTGTTGGGCGAGGAATTCAAATGTTCAGGATATTGATGACACGGCAATGGGATTCAGAATTCTAAGATTACATCGCCGCGAAGTTTCAGCCAATGTGTTCAAGAACTTTGAGAGAAATGGAGAGTTCTTCTGCATTGCTGGGCAGTCAACACAAGCGGTGACAGGAATGTTCAATCTGTATAGGGCAAGTCAAGTAGGGTTTCCAGGAGAGAAGATTCTGGAAGATGCAAAGAAGTTCTCAGTCAAATTTCTGAGAGAGAAAAGAGCAGCAAATGAGCTCATAGATAAATGGATCATCATGAAGAACTTACCCGGAGAGGTGGCTTATGCATTGGACGTGCCGTGGTACGCAAGCTTACCTCGAATAAAGACAAGGTTTTATATTGATCAATATGGTGGTGACACTGATGTCTGGATTGGCAAAACCCTTTATAGGATGGGGAAGGTGAGTAATAACACTTATCTTGAGCTAGCAAAGTTAGATTACAACAATTGCCAAGAGTTGCATCAGACAGAATGGAGAAATATTGAACAGTGGTACTCGGAATGCAGATTGGGAGAGTTTGGATTGAACAGAAGATCTCTTCTGATTGCTTATTTTGTTGCAGCATGCAGCATATTTGAGCCCGAAAGGTCTTTAGTGAGAATTGCTTGGGCCAAAACGGTAGCCTTGCTCAACACCATTACAACTTATGTTAGTGATGAAGAAATGAGGAATGCTTTTGTTGATAAATTCAGCCACTACATCAATGGAGGAGGAGATTTCTCCATTGACTGGAGGTTGAATGGGTACAAAACAGGGCAGGGACCGGTGGATGCTTTGGTTGGAACCATAGATCAACTCTCTTGGGAAACTCTTCTATCTCATGGTCATAAAATTGGCCGTGACATGCAACAAAGTTGGCAAAAGTGGCTTTCAAGTTGGCATGGTGGAGGAGACAAGAGGGAAGGACAAGCAGAGCTTTTGGTGCAAATAATTAACCTTAGCGCAGGCCACGGAATATCAGAGGAACTACTGTTCAACCATCAATACCAGAATCTACTTCAGCTCACAAACACTGTATGTTACAGACTCCGATGCCATCAAAAGGACAAGGCCCACGAGAATGGAAGTTGCAGTATGAAGTACAGCATCAGCACCACAGAAACAGAGGCAAAGATGCAAGAACTTGTGCAAGTGGTGCTTCAAATATCTTCTAGTGACATTGATTCCAATATCAAGGACACTTTCCTCACAGTAGCCAAGAGTTTTTACTACGAAGCTTTCTGCGACGAAAGAACTATTGACTTCCACATTGCCAAAATTCTCTTTGAGAAAGTCATTTAA 2283 0.4306 MSAFCCAEFADIFQGGFPTFKWPEIVQDGIHEEEAHKTSVSNEIKKRVEAIRRILGSMDDGDINISAYDTAWVALVQDVNRSGVPQFPSSLEWIVNNQLPDGSWGDKQVFSAHDRIINTLACVIALKTWNIHPEKCHKGLAFFRENISKLGDENAEHMPIGFEVAFPSLLDIARDLNIQVPDDSPVLKQILAMRNVKLTRIPREMMHKVPTTLLHSLEGMSGLDWKQLLKLQCQDGSFLFSPSSTAFALMQTHNQNCLNYLNKVITKFNGGVPNVYPVDLFEHIWIVDRLERLGISRYFKQEVEECVSYVHRYWTEKGICWARNSNVQDIDDTAMGFRILRLHRREVSANVFKNFERNGEFFCIAGQSTQAVTGMFNLYRASQVGFPGEKILEDAKKFSVKFLREKRAANELIDKWIIMKNLPGEVAYALDVPWYASLPRIKTRFYIDQYGGDTDVWIGKTLYRMGKVSNNTYLELAKLDYNNCQELHQTEWRNIEQWYSECRLGEFGLNRRSLLIAYFVAACSIFEPERSLVRIAWAKTVALLNTITTYVSDEEMRNAFVDKFSHYINGGGDFSIDWRLNGYKTGQGPVDALVGTIDQLSWETLLSHGHKIGRDMQQSWQKWLSSWHGGGDKREGQAELLVQIINLSAGHGISEELLFNHQYQNLLQLTNTVCYRLRCHQKDKAHENGSCSMKYSISTTETEAKMQELVQVVLQISSSDIDSNIKDTFLTVAKSFYYEAFCDERTIDFHIAKILFEKVI 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1480 760 SFLD Terpene Cyclase Like 1 N-term 36 464 - -
Lele05g1480 760 FunFam Ent-copalyl diphosphate synthase, chloroplastic 484 760 - -
Lele05g1480 760 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 67 250 IPR008930 -
Lele05g1480 760 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 36 464 - -
Lele05g1480 760 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 41 758 - -
Lele05g1480 760 Pfam Terpene synthase family, metal binding domain 474 624 IPR005630 GO:0000287|GO:0010333|GO:0016829
Lele05g1480 760 FunFam Ent-copalyl diphosphate synthase, chloroplastic 256 481 - -
Lele05g1480 760 Pfam Terpene synthase, N-terminal domain 224 430 IPR001906 GO:0010333|GO:0016829
Lele05g1480 760 Gene3D - 67 279 - -
Lele05g1480 760 Gene3D - 50 482 IPR036965 GO:0010333|GO:0016829
Lele05g1480 760 SUPERFAMILY Terpenoid synthases 470 739 IPR008949 -
Lele05g1480 760 FunFam Ent-copalyl diphosphate synthase 67 279 - -
Lele05g1480 760 Gene3D Farnesyl Diphosphate Synthase 484 760 IPR008949 -
Lele05g1480 760 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 235 454 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1480 Lele-ChrLele05 9476011 9481945 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1480 05 9476011 9481945 Lele05g1480 05 9476011 9481945 ECH
Lele05g1480 05 9476011 9481945 Lele07g1540 07 9466461 9470758 hybridization
Lele05g1480 05 9476011 9481945 Lele08g1331 08 8487338 8492375 hybridization