Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1336 ATGTATTCCCTCTTCCCTCTCTCTCCTCTCCCTTCTTCTTCTCTCTCTTTGCCTTCTTCCTCCTCAAAATCGCCCCTCCTCCTTGAATTCGCTGACATATTTCAGGGTGGTCTTCCAACGTTCAAGTGGCGTGAAATTGTGCAGGATGATATCCACGAGGAGGAAGCTCATAAGGTTCCGGTGAGCAATGAGATCAAAAAGCGAGTGGAAGCTATCAGACGGATATTGGGTTCCATGGATGATGGTGACATCAGCATATCTGCATACGACACAGCATGGGTTGCTCTTGTTCAAGATGTTAATGGAAGTGGTGTCCCACAATTCCCTTCCAGTCTCGAATGGATAGTGAACAACCAGCTTCCCGATGGTTCATGGGGTGATAAACAAGTTTTCTCCGCTCACGATCGAATCATCAACACGTTGGCTTGTGTTATTGCATTAAAAACATGGAATATCGATCCTGAAAAGTGCCACAAAGGGCTAGCGTTTTTCAGAGAAAACATCAGCAAGCTTGAGGATGAGAATGCTGAGCATATGCCAATCGGTTTTGAAGTTGCTTTCCCTTCTCTTCTGGATATAGCTCGTGATCTGAGCATTCAAGTACCGGATGATTCTCCAGTCCTGAAAAAAATCTTGGCCATGAGAAATGTAAAGCTGACCAGAATACCAAGAGAGATGATGCATAAAGTGCCTACAACACTGCTTCATAGCTTGGAGGGCATGTCAGGATTGGATTGGAAGCAGCTTCTAAAATTGCAGTGTAAAGATGGCTCTTTCTTGTTTTCTCCCTCCTCCACTGCCTTTGCTCTTATGCAGACTCATGACCAAAATTGCCTCAATTACTTGAATAAAGTAATCACCAACTTCAATGGTGGAGTTCCAAACGTGTACCCAGTGGATTTGTTCGAATATATTTGGGTCGTTGATCGTTTGGAGCGCCTTGGAATTTCCAGATATTTTAAGCAAGAGGTGGAGGAATGTGTCAGCTATGTTCATAGATATTGGACCGATAAGGGAATTTGTTGGGCGAGAAATTCAAATGTTCAGGATATTGATGACACAGCAATGGGATTCAGAATGCTAAGATTACATGGCCGTGAAGTTTCAGCCAATGTGTTTAAGAACTTTGAGAGAAATGGTGAGTTCTTCTGCATTGCTGGGCAGTCTACACAAGCAGTGACAGGAATGTTCAATCTGTATAGGGCAAGTCAAGTAGGGTTTCCAGGAGAGAAGATTTTGGAAGATGCAAAGAAGTTCTCAGCCAAATTTCTGAGGGAGAAAAGAGCAGCAAATGAGCTCATAGATAAATGGATCATCATGAAGAACTTACCCGGAGAGGTGGCTTATGCATTGGACGTGCCATGGTATGCAAGCTTACCTCAAATAGAGACAAGGTTTTATATTGATCAATATGGTGGTGACACTGACGTCTGGATTGGCAAAACTCTTTATAGGATGGGGAAGGTGAGTAATAACACTTACCTTGAGCTAGCAAAGTTAGATTACAACAATGTTCAAGAGTTGCATCAGACAGAATGGAGCAATATTCAACAGTGGTGCTCAGAATGCAGATTGGGAGAGTTTGGATTGAACAGAAGATCTCTTCTGATAGCTTATTTTGTGGCAGCATGCAGCATATTTGAGCCCGAAAGGTCTCTAGAGAGAATTGCATGGGCCAAAACAGGGGCCTTGCTCAACACCATTACAGCTTATGTTACTGATGAAGAAATGAGGAATGCTTTTGTTGACAAATTCAACCACTACATCAATGGAGGAGGAGACTTCTCTATTGGCTGGAGGTTGAATGGGTACAAAACCGGGCAGGGACTAGTGGATGCTTTGGTTGGAACCATTGATCAACTCTCTTGGGAAACTCTTCTATCTCATGGTCATAAAATTGGCCTTGACATGCAACAAAGTTGGCAAAAGTGGCTTTCAAATTGGCATGGTGGGGGAGACAATAGGGAAGGACAAGCAGAGCTTTTGGTGCAAATAATTAACCTTAGCGCAGGCCACAGAATACCAGAGGAACTACTGTTCAACCATCAATACCAGAATCTACTTCAGCTCACAAACATTGTTTGTTACAGACTCCAATGCCATCAAAAGGACAAGGCCCACGAGAATGGAAGTTGCAGTATGAAGTACAGCATCAGCACCACAGAAACAGAGGCAAAGATGAAAGAACTTGTGCAAGTGGTGCTTCAGAAATCTTCTAGTGACATTGATTCCAATATCAAGAACACTTTCCTCACAATAGCCAAGAGTTTTTACTACGAAGCTTTCTGTGATGAAAGAACTATCGACTTCCACATTGCCAAAGTTCTCTTTGACAAAGTCCTTTAA 2346 0.4292 MYSLFPLSPLPSSSLSLPSSSSKSPLLLEFADIFQGGLPTFKWREIVQDDIHEEEAHKVPVSNEIKKRVEAIRRILGSMDDGDISISAYDTAWVALVQDVNGSGVPQFPSSLEWIVNNQLPDGSWGDKQVFSAHDRIINTLACVIALKTWNIDPEKCHKGLAFFRENISKLEDENAEHMPIGFEVAFPSLLDIARDLSIQVPDDSPVLKKILAMRNVKLTRIPREMMHKVPTTLLHSLEGMSGLDWKQLLKLQCKDGSFLFSPSSTAFALMQTHDQNCLNYLNKVITNFNGGVPNVYPVDLFEYIWVVDRLERLGISRYFKQEVEECVSYVHRYWTDKGICWARNSNVQDIDDTAMGFRMLRLHGREVSANVFKNFERNGEFFCIAGQSTQAVTGMFNLYRASQVGFPGEKILEDAKKFSAKFLREKRAANELIDKWIIMKNLPGEVAYALDVPWYASLPQIETRFYIDQYGGDTDVWIGKTLYRMGKVSNNTYLELAKLDYNNVQELHQTEWSNIQQWCSECRLGEFGLNRRSLLIAYFVAACSIFEPERSLERIAWAKTGALLNTITAYVTDEEMRNAFVDKFNHYINGGGDFSIGWRLNGYKTGQGLVDALVGTIDQLSWETLLSHGHKIGLDMQQSWQKWLSNWHGGGDNREGQAELLVQIINLSAGHRIPEELLFNHQYQNLLQLTNIVCYRLQCHQKDKAHENGSCSMKYSISTTETEAKMKELVQVVLQKSSSDIDSNIKNTFLTIAKSFYYEAFCDERTIDFHIAKVLFDKVL 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1336 781 SFLD Terpene Cyclase Like 1 N-term 58 485 - -
Lele06g1336 781 FunFam Ent-copalyl diphosphate synthase, chloroplastic 277 502 - -
Lele06g1336 781 FunFam Ent-copalyl diphosphate synthase, chloroplastic 505 781 - -
Lele06g1336 781 Gene3D Farnesyl Diphosphate Synthase 506 781 IPR008949 -
Lele06g1336 781 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 58 485 - -
Lele06g1336 781 MobiDBLite consensus disorder prediction 1 20 - -
Lele06g1336 781 FunFam Ent-copalyl diphosphate synthase 88 300 - -
Lele06g1336 781 Gene3D - 88 300 - -
Lele06g1336 781 Pfam Terpene synthase, N-terminal domain 245 451 IPR001906 GO:0010333|GO:0016829
Lele06g1336 781 Gene3D - 71 503 IPR036965 GO:0010333|GO:0016829
Lele06g1336 781 SUPERFAMILY Terpenoid synthases 491 760 IPR008949 -
Lele06g1336 781 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 62 778 - -
Lele06g1336 781 Pfam Terpene synthase family, metal binding domain 495 645 IPR005630 GO:0000287|GO:0010333|GO:0016829
Lele06g1336 781 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 255 475 IPR008930 -
Lele06g1336 781 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 88 271 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1336 Lele-ChrLele06 8545923 8550929 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1336 06 8545923 8550929 Lele06g1336 06 8545923 8550929 ECH
Lele06g1336 06 8545923 8550929 Lele07g1540 07 9466461 9470758 hybridization
Lele06g1336 06 8545923 8550929 Lele08g1331 08 8487338 8492375 hybridization