Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1328 ATGGATACTCCGGTGAACAGCCCCTCCTCATCCACGGCCAAGCGTCCCTGTCCTTCCCAAAGCCCAAACCCTAGAATCCAAAGCCTCAACCAGGTGGACCAGTTCTTGGATAACTTCCTCCGCCTTTCTGAATCCCCTTCCCTCTCCCTCGATCTCTCCTTGGAGAGGCTTCTCTCTTCATTGCCCACCGATGCGGATCAGACCCTTATCATCGATCGCGCCCTTCATATGGGATCCATGCTTCTCGATGCTGCCAAACACTCTTCCCGAAAGCGAGCCTCCAGACACAATTCTTTTGCTTGGCCTCTCCCTCCTGACGTTACCGTCAAAGTGTTTTCATTGCTTGATAGCCAGAGCCTATGCTATGCAGCAGCTACTTGTTCAATGTTTAACCGATGTGCTAGGGATCCTTCGTGCTATGAAAATATTGATTTGACAACACTTGTTCCCAAAGTTAACAATGCAGTAGTTTCCACGATGATTCAGCGAGCTGGAAAGGCCTTAAGGTCTCTTAGGCTCGGTGTAGTTGCTGGTGCTCATGCGTCACCAGGATCCTGTCAGCCGTTGGTTTATACCATCAGAAATGCCACCGTAGATGTATCTAACTTTTCATGGAATGACAAGAGATCTCGGCAAGGGAGAGAGTCATGCATTCTTAGTCGATCCTGTTTAAACCCTTTAACCGGATGTGGTGGTTCTCCAGGGACTCTTCTGAGAAAGTTGCACTTGTACAATATTGAAAGAATGGATAATTCATCCCTTTGTGCGGCATTAGGAGCCTGCCCTTCTCTCCTTGACCTGGAAATAGTTGGACTTCATGTAGAAATGAGGCAAACATTAATGTCAGTGAGTACGAACTGCCCCTTGATTGAGCGTTTGTTTTTTGAGTCTTCAAAAACAGGCAGAGATGACAGTTTGAAAACGCCAACCTGCATTCTTCTTGTTAACAGCTGTCCCCATCTAACTTCTTTGTCCCTTAGAGGGTTTAAGTTACATGATTACAAAGTGCGTATACTGCTTAAGGGATTTCAGAAACTGAAGTATGTTGATTTTTCAACATCCTATTCAATCACTGGAAACTTTTTAAGAAACCTTGGAAGTAGCAATGGAGGGAATTTGCTTGAGGTATTGATTTTGAGGGACTGCTTGCATCTGAAAGAGGTGGAAGTTGCTAGATTGTTGACAGCAATTCTTGCAGGAGATTTCAAATGTCTTTTACATCTTGACATATCCAATAGGGAAGGCTTAGCATCTGAGGGGGACTGGTATCACGGTTTGTTCAACTCTAGCATCATGCCTATTAAGCATGTTTTGGAAGCAAGGCCTTATTTGTGTTTGCTGGCTGAATATCCATCGGAAGGAAGTTACATTGAGACAATTGATGCTGAACTGAATGGTGATATGAGTTTTTCATTACAATTGAGCGGCCATACTTCAGATGAAATAAATTGTTTGAATACATCTGAAAGCAGCTACAATAGTGATCAGGGCAGTGGCAGTGAGGATGGTTAA 1512 0.4438 MDTPVNSPSSSTAKRPCPSQSPNPRIQSLNQVDQFLDNFLRLSESPSLSLDLSLERLLSSLPTDADQTLIIDRALHMGSMLLDAAKHSSRKRASRHNSFAWPLPPDVTVKVFSLLDSQSLCYAAATCSMFNRCARDPSCYENIDLTTLVPKVNNAVVSTMIQRAGKALRSLRLGVVAGAHASPGSCQPLVYTIRNATVDVSNFSWNDKRSRQGRESCILSRSCLNPLTGCGGSPGTLLRKLHLYNIERMDNSSLCAALGACPSLLDLEIVGLHVEMRQTLMSVSTNCPLIERLFFESSKTGRDDSLKTPTCILLVNSCPHLTSLSLRGFKLHDYKVRILLKGFQKLKYVDFSTSYSITGNFLRNLGSSNGGNLLEVLILRDCLHLKEVEVARLLTAILAGDFKCLLHLDISNREGLASEGDWYHGLFNSSIMPIKHVLEARPYLCLLAEYPSEGSYIETIDAELNGDMSFSLQLSGHTSDEINCLNTSESSYNSDQGSGSEDG 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1328 503 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 102 408 - -
Lele08g1328 503 SUPERFAMILY F-box domain 98 148 IPR036047 GO:0005515
Lele08g1328 503 Gene3D Ribonuclease Inhibitor 96 399 IPR032675 -
Lele08g1328 503 FunFam F-box protein isoform A 96 397 - -
Lele08g1328 503 Pfam F-box-like 103 145 IPR001810 GO:0005515
Lele08g1328 503 SUPERFAMILY RNI-like 235 413 - -
Lele08g1328 503 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1328 Lele-ChrLele08 8465192 8469897 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1328 08 8465192 8469897 Lele08g1328 08 8465192 8469897 ECH
Lele05g1477 05 9454964 9459725 Lele08g1328 08 8465192 8469897 hybridization
Lele06g1332 06 8524490 8529368 Lele08g1328 08 8465192 8469897 hybridization