Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1332 ATGAGTGTGATAATATCGACCTCCACTCACCCCTTCCCGGTAAAGCCTACAGCCATGGATACTCCGGTGAACAGCCCCTCCTCATCCACGGCCAAGCGTCCCTGTCCTTCCCAAAGCCCAAACCCAAGAATCCAAAGCCTCAACCAGGTGGACCAGCTCCTGGATAATTTTCTCCGCCTTTCTGAATCCCCTTCCCTCTCCCTCGATCTCTCCTTCGAGGGGCTTCTCTCTTCATTGCCCACCGATGCCGATCAGACCCTTCTCATCGATCGCGCCCTTCATATGGGATCCATGCTTCTCGATGCTGCCAAACACGCTTCCCGAAAGCGAGCCTCCAAGCACAATTCTTTTGCTTGGCCTCTCCCTCCTGACCTTACCGTCAAAGTGTTTTCATTGCTTGATAGCCAGAGCCTATGCTATGCAGCAGCTACTTGTTCAATGTTTAACAGATGTGCTAGGGATCCTTCGTGCTATGAAAATATTGATTTGACAACACTTATTCCCAAAGTTAACAATGCAGTAGTTTCCACGATGATTCAGCGAGCTGGAAAGGCCTTAAGGTCTCTTAGGCTTGGTATAATTGCTGGTGCTCATGCGTTACCAGGATCCTGTCAGCCATTGGTTTATACCATCAGAAATGCCACTGTAGATGTATCTAACTTTTCATGGAATGACAAGAGATCTCGGCAAGGGAGGGAGTCATGCATTCTTACTCGATCCTGTTTAAACCCTTTAACCGGATGTGGTGGCGCTCCAGGGACTCTTCTGAGAAAGTTGCACTTGTACAATATTGAAAGAATGGATAATTCATCCCTTTGTGCGGCATTAGGAGCCTGCCCTTCTCTCCTTGACCTGGAAATAGTTGGACTTCATGTAGAAATGAGGCAAACATTAATGTCAGTGAGTACGAACTGCCACTTGATTGAGCGTTTGTTTTTTGAGTCTTCAAAAGCAGGCAGAGATGACAGTTTGAAAACGCCAACCTGCATTCTTCTTGTTAACAGCTGCCCCCATCTAACTTCTTTGTCCCTTAGAGGGTTTAAGTTACATGATTACAAAGTTCGTATACTGCTTAAGGGATTTCAGAAACTGAAATATGTTGATTTTTCAACATCCTATTCAATCACTGGAAACTTTTTAAGAAACCTTGGAAGTAGCAATGGAGGGAATTTGCTTGAGGTATTGATTTTGAGGGACTGCATGCATCTGAAAGAGGTGGAAGTTGCTAGATTGTTGACAGCAATTCTTGCAGGAGATTTCAAATGTCTTGTACATCTTGATATATCCAATAGGGAAGGCTTAGCATCTGAGGGGGACTGGTATCACAGGTGTTACAACTCTAGTATCATGCCTATCAAGCATGTTTTGGAAGCAAGGCCTGATTTGTGTTTGCTGGCTGAATATCCATCGGAAGGAAGTTACATTGAGACAATTGATGCTGAACTGAATGGTGATATGAGTTTTTCATTACAATTGAGCAGCCATACTTCAGGTGAAATAAATTGTTTGAGTACATCTGAAAGCAGCTACAATAGTGATCAGGGCAGTGGCAATGAGGATGGTCAAGAAGCCAGCTCTGTGATTTATCAAGAAAGTTCAGATGAGATAGACTTTCTGGCCCCGTAG 1626 0.4459 MSVIISTSTHPFPVKPTAMDTPVNSPSSSTAKRPCPSQSPNPRIQSLNQVDQLLDNFLRLSESPSLSLDLSFEGLLSSLPTDADQTLLIDRALHMGSMLLDAAKHASRKRASKHNSFAWPLPPDLTVKVFSLLDSQSLCYAAATCSMFNRCARDPSCYENIDLTTLIPKVNNAVVSTMIQRAGKALRSLRLGIIAGAHALPGSCQPLVYTIRNATVDVSNFSWNDKRSRQGRESCILTRSCLNPLTGCGGAPGTLLRKLHLYNIERMDNSSLCAALGACPSLLDLEIVGLHVEMRQTLMSVSTNCHLIERLFFESSKAGRDDSLKTPTCILLVNSCPHLTSLSLRGFKLHDYKVRILLKGFQKLKYVDFSTSYSITGNFLRNLGSSNGGNLLEVLILRDCMHLKEVEVARLLTAILAGDFKCLVHLDISNREGLASEGDWYHRCYNSSIMPIKHVLEARPDLCLLAEYPSEGSYIETIDAELNGDMSFSLQLSSHTSGEINCLSTSESSYNSDQGSGNEDGQEASSVIYQESSDEIDFLAP 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1332 541 Gene3D Ribonuclease Inhibitor 113 410 IPR032675 -
Lele06g1332 541 SUPERFAMILY RNI-like 253 433 - -
Lele06g1332 541 MobiDBLite consensus disorder prediction 503 527 - -
Lele06g1332 541 Pfam F-box-like 121 163 IPR001810 GO:0005515
Lele06g1332 541 SUPERFAMILY F-box domain 115 165 IPR036047 GO:0005515
Lele06g1332 541 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 121 398 - -
Lele06g1332 541 MobiDBLite consensus disorder prediction 1 44 - -
Lele06g1332 541 FunFam F-box protein isoform A 114 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1332 Lele-ChrLele06 8524490 8529368 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1332 06 8524490 8529368 Lele06g1332 06 8524490 8529368 ECH
Lele06g1332 06 8524490 8529368 Lele07g1536 07 9446755 9451534 hybridization
Lele06g1332 06 8524490 8529368 Lele08g1328 08 8465192 8469897 hybridization