Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1477 ATGGATACTCCAGTGAACAGCCCCTCCTCATCAATGGCCAAGCGTCCCTGTCCTTCCCAAAACCAAAACCCTAGAGTCCAAAGCCTCAACCAGGTGGACCAGCTCCTCGATAATTTCCTCAGCCTTTCTGAATTCCCTTCCCTCTCCCTTGATCTCTCCCTGGAGAGGCTTCTCTCTTCATTGCCCACCGATGCCGATCAGACCCTTCTCATCGATCGCGCCCTTCATATGGGATCCATGCTTCTCGATGCTGCCAAACACTCTTCCCGAAAGCGAGCCTCCAAGCACAATTCTTTTGCTTGGCCTCTCCCTCCTGACCTTACCGTCAAAGTGTTTTCAATGCTTGATACCCAGAGCCTATGCTATGCAGCAGCTACTTGTTCAATGTTTAACAAATGTGCTAGGGATCCTTTGTGCTATGAAAATATTGATTTGACAACATTTGTTCCCAAAGTTAACAATGCAGTAGTTTCCACGACGATTCAGCGAGCTGGAAAGGCCTTAAGGTCTTTTAGGCTCGGTGTAATTGCTGGCGCTCATGCGTCACCAGGATCCTGTCAGCCATTGGTTTATACCATCAGAAATGCCAATGTAGATGTATCTAACTTTTCATGGAATGACAAGAGATCTCGGCAAGGGAGAGAGTCGTCCATTCTTACACGATCCTGTTTAAACCCTTTAACCGGATGTGGTGGTGGTGGTGCCCCAGGGACTCTTCTGAGAAAGTTGCACTTGTACAATATTGAAAGAATGGATAATTCATCCCTTTGGGCGGTATTAGGAGCCTGCCCTTCTCTCCTTGACCTGGAAATAGTTGGACTCCATGTAGAACTGAGGCAAACATTAATGTCAGTGAGTACGAACTGCCACTTGATTGAGCGTTTGTTTTTTGAGTCTTCAAAAACAGGCAGAGATGACAGTTTGAAAACGCCAACCTGCATTCTTCTTGTTAACAGCTGCCCCAATTTAACTTCTTTGTCCCTTAGAGGGTTTAAGTTACATGATTGCAAAGTTCGCATACTTCTTAAGGGATTTCATAAACTGAAATATGTTGATTTTTCAACATCCTATTCAATCACTGGAAACTTTTTAAGAAACCTTGGAAGTAGCAATGGAGGGAATTTGCTTGAGGTATTGATTTTGAGGGACTGCATGCATCTGAAAGAGGTGGAAGTTTCTAGATTGTTGACAGCAATTCTTGCAGGAGATTTCAAATGTCTTGTACATCTTGACATATCCAATAGGGAAGGCTTAGTATCTGAGGGGGACTGGTATCACAGGTGCTACAACTCTAGCATCATGCCTATTAAGCATGTTTTGGAAGCAAGGCCTGATTTGTGTTTGCTGGCTGAATATCCGTCAGAAGGAAGTTACATTGAGACAATTGATGCTGAACTGAATGGTGATATGAGTTTTACATTACAATCGAGCAGTCATAATTCAGATGAAATAAATTGTTTGAGTACATGTGAAAGCAGCTACAATAGTGATCAGGGCAGTGGCAATGAGGATGGTCAAGAAGCCAGCTATGTGATTTATGAAGAAAGTTCAGATGAGATAGACTTTCTGGCCCTGTAG 1578 0.4373 MDTPVNSPSSSMAKRPCPSQNQNPRVQSLNQVDQLLDNFLSLSEFPSLSLDLSLERLLSSLPTDADQTLLIDRALHMGSMLLDAAKHSSRKRASKHNSFAWPLPPDLTVKVFSMLDTQSLCYAAATCSMFNKCARDPLCYENIDLTTFVPKVNNAVVSTTIQRAGKALRSFRLGVIAGAHASPGSCQPLVYTIRNANVDVSNFSWNDKRSRQGRESSILTRSCLNPLTGCGGGGAPGTLLRKLHLYNIERMDNSSLWAVLGACPSLLDLEIVGLHVELRQTLMSVSTNCHLIERLFFESSKTGRDDSLKTPTCILLVNSCPNLTSLSLRGFKLHDCKVRILLKGFHKLKYVDFSTSYSITGNFLRNLGSSNGGNLLEVLILRDCMHLKEVEVSRLLTAILAGDFKCLVHLDISNREGLVSEGDWYHRCYNSSIMPIKHVLEARPDLCLLAEYPSEGSYIETIDAELNGDMSFTLQSSSHNSDEINCLSTCESSYNSDQGSGNEDGQEASYVIYEESSDEIDFLAL 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1477 525 FunFam F-box protein isoform A 96 399 - -
Lele05g1477 525 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 102 505 - -
Lele05g1477 525 Gene3D - 86 166 - -
Lele05g1477 525 SUPERFAMILY F-box domain 89 151 IPR036047 GO:0005515
Lele05g1477 525 Gene3D Ribonuclease Inhibitor 199 416 IPR032675 -
Lele05g1477 525 MobiDBLite consensus disorder prediction 1 25 - -
Lele05g1477 525 SUPERFAMILY RNI-like 238 417 - -
Lele05g1477 525 Pfam F-box-like 103 145 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1477 Lele-ChrLele05 9454964 9459725 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1477 05 9454964 9459725 Lele05g1477 05 9454964 9459725 ECH
Lele05g1477 05 9454964 9459725 Lele07g1536 07 9446755 9451534 hybridization
Lele05g1477 05 9454964 9459725 Lele08g1328 08 8465192 8469897 hybridization