Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1317 ATGGGAGAGGAAATGATGCTTGAACACGAGGCAGTGGCTAGGCACAAATCCTGTGCTAGAAGATTGACAGACACGGATAAAATAGTGATTATGTCTGGATTGATTGAAGGACTTCCTGATGCAGTTGCGATAAGGTGCCTTGCAATGGTTCCCTTTTACCTCCATCCAAAGTTAGAGCTTGTCTCTCGCTCTTGGCGAGCAGCCATCCATAGCCTTGAACTATTTAAAGCACGACAGGAGGTTGGCTCATCTGAGGATCTGTTGTGTGTATGTGCTTTTGATCCAGAGAACCTTTGGCAGCTGTATGACCCTCTACGGGATCTTTGGATTACACTTCCTGTTCTTCCCTCAAAAATCAGACACCTGTCCCGCTTTGGTGCTGTCTCCACTGCTGGAAAGTTGTTTGTGATTGGTGGCGGAAGTGATGCTGTAGATCCGTTGACTGGTGATCAAGATGGGAGCTTTGCAACAAACGAAGTCTGGTCATATGACCCTGTAGTCCGGCAGTGGGCCCAACGGGCTTCAATGCTTGTCCCTCGTTCTATGTTCGCATGCTGTGTTTTGAATGGAAAGATAATTGTGGCCGGGGGCTTCACTAGCTACAGAAAATCAGTATCTCAAGCAGAGATGTATGACCCTGAAAAAGATGCGTGGATTCAAATGCCTAATCTTCATTGCGCCCATAATTCAGCTTGTTCAGGAGTAGTTATTGGAGGAAAGGTACACGTATTGCATAAAGGGTTGTCGACAGTACAAGTTTTAGACAATGGAGGGGCTCCTGGGTGGACTGTTCAGGAAAGTGGGTGGCTCCAAGGTCCGATGGCGGTTGTTGGAGGTGCTCTTTATGTGATGAGCCATGGATTTATTATCAAGCAGGACAAAGGAGAGAGAAAGATAATGGGTTTAGCAAATGAGTTTCAAAGGAGAATCGGGTTTGGAATGATTGGGGTTGGTGGTGATCTATATGTAATTGGAGGCGTTGTTGGCCCTGACGGGTTGAACTGGGACATAAATCCTTTGGCTGACGTTGATATTCTCACACCACTTGGGAGTGACAGAACAACCTGGCGTCAGGCGTCTCCAATGTCACGGTGTCATGGTACTATCCTTGGTTGTACATTGCTGAGAATTTAG 1134 0.4683 MGEEMMLEHEAVARHKSCARRLTDTDKIVIMSGLIEGLPDAVAIRCLAMVPFYLHPKLELVSRSWRAAIHSLELFKARQEVGSSEDLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLSRFGAVSTAGKLFVIGGGSDAVDPLTGDQDGSFATNEVWSYDPVVRQWAQRASMLVPRSMFACCVLNGKIIVAGGFTSYRKSVSQAEMYDPEKDAWIQMPNLHCAHNSACSGVVIGGKVHVLHKGLSTVQVLDNGGAPGWTVQESGWLQGPMAVVGGALYVMSHGFIIKQDKGERKIMGLANEFQRRIGFGMIGVGGDLYVIGGVVGPDGLNWDINPLADVDILTPLGSDRTTWRQASPMSRCHGTILGCTLLRI 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1317 377 Pfam Kelch motif 123 176 IPR006652 GO:0005515
Lele08g1317 377 Pfam Kelch motif 179 224 IPR006652 GO:0005515
Lele08g1317 377 Pfam Kelch motif 308 363 IPR006652 GO:0005515
Lele08g1317 377 PANTHER OS02G0202900 PROTEIN 6 286 IPR045887 -
Lele08g1317 377 SUPERFAMILY Kelch motif 91 346 IPR015915 GO:0005515
Lele08g1317 377 Gene3D - 90 374 IPR015915 GO:0005515
Lele08g1317 377 SMART kelc_smart 191 238 IPR006652 GO:0005515
Lele08g1317 377 SMART kelc_smart 320 376 IPR006652 GO:0005515
Lele08g1317 377 SMART kelc_smart 133 190 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1317 Lele-ChrLele08 8417459 8419112 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1317 38 302 Miscellaneous Gene Families AT4G33900 26.165 1.71e-14 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1317 08 8417459 8419112 Lele08g1317 08 8417459 8419112 ECH
Lele05g1466 05 9412286 9414388 Lele08g1317 08 8417459 8419112 hybridization
Lele06g1322 06 8469212 8477826 Lele08g1317 08 8417459 8419112 hybridization