Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1466 ATGTCTGAATCCATGCACAAGCCACTAACAAAATACGATTCCCTCGGTTTTATTCGAACGATATGGTATTTGGTTTTCTTTGATTTCACTTTGAACTTTTCCTTGGCAGAGCATCGAGCGTATGATTCAAGAATCAAGCCTATGTGCTATGACATTCTGAGACGCACTGAATACAAGGCTGCATACATGCTGTGTGGATTGATAGGCACGGATGCAATAGTGATTACCATGTCTGGATTGATTGAAGGACTTCCTGATGCAGTTGCAATAAGGTGCCTTGCGAGGGTTCCCTTTTACCTCCACCCAAAATTAGAGCTTGTTTCTCGCTCTTGGCGAGCAGCCATTCATAGCGTTGAACTATTTAAAGTGCGACAGGAGGTTGGTTCATCTGAGGATCTGTTATGTGTATGTGCTTTTGATCCAGAGAACCTATGGCAGCTGTATGACTCTTTGCGGGATCTTTGGATTACACTTCCTGTTCTTCCCTCAAAAGTCAGACACCTTGCCCGCTTTGGTGCCGTCTCCACTGCTGGAAAGTTGTTTGTGATTGGTGGCGGAAGTGATGCTGTAGATCCGTTGACTGGTGATCAAGATGGGAGCTTTGCAACCAATGAAGTCTGGTCATATGACCCCGTTGTCCGGCAGTGGGCCCCACAGGCTTCAATGCTTGTCCCTCGTTCTATGTTCGCATGCTGTGTTTTGAATGGAAAAATAATTGTTGCCGGGGGCTTCACTAGCTACAGAAAATCAGTATCTCAAGCAGAAATGTACGACCCTGAAAAAGATGTGTGGATTGAAATGCCGAATCTTCATTGCGTCCACAATTCAGCTTGTTCAGGAGTAGTTATTGGAGGAAAGGTACACGTATTGCATAAAGGGTTGTCAACAGTGCAAGTTTTAGACAATGGAGGGGCTCCTGGGTGGACTGTTCAGGAAAGCGGGTGGCTCCAAGGTCCGATGGCAGTTGTTGGAGGCGCCCTTTATGTGATGAGCCATGGATTTATTATCAAGCAGGACAAAGGAGAGAGAAAGATAGTGGGTTTAGCAAATGAGTTTCAAAGTAGAATCGGGTTTGGAATGATTGGGGTTGGTGATGATCTATATGTAGTAGGAGGCGTGGTTGGCCCTGGAGGTTTGAACTGGAACATTAAGCCTATGGCTAATGTTGATATTCTCACACCACATGGGAGTGACAGAACAACCTGGCGTCAGGCGTCTCCAATGTCACGGTGTCGTGGTACTATCCTTGGTTGTACATTGCTGAGAATTTAG 1272 0.4583 MSESMHKPLTKYDSLGFIRTIWYLVFFDFTLNFSLAEHRAYDSRIKPMCYDILRRTEYKAAYMLCGLIGTDAIVITMSGLIEGLPDAVAIRCLARVPFYLHPKLELVSRSWRAAIHSVELFKVRQEVGSSEDLLCVCAFDPENLWQLYDSLRDLWITLPVLPSKVRHLARFGAVSTAGKLFVIGGGSDAVDPLTGDQDGSFATNEVWSYDPVVRQWAPQASMLVPRSMFACCVLNGKIIVAGGFTSYRKSVSQAEMYDPEKDVWIEMPNLHCVHNSACSGVVIGGKVHVLHKGLSTVQVLDNGGAPGWTVQESGWLQGPMAVVGGALYVMSHGFIIKQDKGERKIVGLANEFQSRIGFGMIGVGDDLYVVGGVVGPGGLNWNIKPMANVDILTPHGSDRTTWRQASPMSRCRGTILGCTLLRI 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1466 423 PANTHER OS02G0202900 PROTEIN 78 332 IPR045887 -
Lele05g1466 423 SUPERFAMILY Kelch motif 137 373 IPR015915 GO:0005515
Lele05g1466 423 Gene3D - 133 421 IPR015915 GO:0005515
Lele05g1466 423 Pfam Kelch motif 169 222 IPR006652 GO:0005515
Lele05g1466 423 Pfam Kelch motif 225 270 IPR006652 GO:0005515
Lele05g1466 423 SMART kelc_smart 237 284 IPR006652 GO:0005515
Lele05g1466 423 SMART kelc_smart 366 422 IPR006652 GO:0005515
Lele05g1466 423 SMART kelc_smart 179 236 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1466 Lele-ChrLele05 9412286 9414388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1466 84 348 Miscellaneous Gene Families AT4G33900 26.335 1.25e-14 73.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1466 05 9412286 9414388 Lele05g1466 05 9412286 9414388 ECH
Lele05g1466 05 9412286 9414388 Lele07g1527 07 9404381 9409082 hybridization
Lele05g1466 05 9412286 9414388 Lele08g1317 08 8417459 8419112 hybridization