Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1322 ATGGCGTTCAGAGTGATGATTCTGGGTCTAGCTGTGGTTCTGTTGGCTAGTTCTCTATGGACTCAAACTGCTGCGCAATTAAGCTGCACAAGTGCACTGACAAGCATGAGCCCCTGCCTTAACTATGTAACGGGAAGTTCATCAACCCCATCTTCTACATGTTGCTCACAGCTCTCGAGTGTGGTTCAATCCTCACCACAGTGCCTCTGCTCTGTTCTTAATGGCGGCGGTTCCTCTCTGGGAATCACCATTAATCAAACTCTTGCTCTCTCTTTACCTGGTGCATGCAAAGTTCAAACTCCTCCCATCAGCCAATGCAAATCAGCTGGTAATGCACCGACCACTCCTTCAAATGCTCCAGCAGGCTCTCCGGTTGGTTCTCCGGAAGGATCCATCGCACCTTCAGACTCAGACGTTCCTAATGCAGGGACAGGCTCTAAGACGGTGCCTAGAGTAGACGGTGGTTCATCAGATGGAAGCACCATGAAAATTTCCTTCCAACGATTTCACTCTCCACAACCCCATCCTCTTCTTGCTGCACTCAGCTTCTCAGTGTGGTTCAGTCACAACCAGAGTGACCATGCCCTGCAGCATTTAGTGGAGCTACTGCTATCTTGGGCTCTAGGGTCACTCCCAATGCTTGTTATGTCAAAAGCCCTACCAGCTAGCCAGTGCAAAGGCTTTTCCTATATAATATTTCAAATTGGCAAAGTCAAACTTGAACCAGTTTGCTTATCCAGAAAGCCAATTGGTATAACTTGCTTCTTATCCGATCCTTACATTATTGGGCAAGATGTGAATGCTCTTTGGGGATTCACAGTGGCTCAGAATGATTCTAGCTGCACCAACGTGCTCATAAGTTTGTCTCCTTGCTTAGACTATGTAACAGGAAACGCCTCCGTTCCTTCTTCTGCTTGTTGCTCCCAACTCGCCTCTGTGGTGAGTTCACAGCCACAGTGCCTTTGCCAGGTCGTCAATGGCGCCGCCGCTTCAGCTGTGGGCATCAACGTCAATCAAACTCAGGCTTTGACACTCCCTAGTGCCTGCAGAGTCCAGACACCTCCTCTTAGCATTTGTCAAGCTTCATCTCCTACGACTGATTCCACTGCTACTGTGACGACAAGTTTCCCTTCAGGAAATGGGTATAGTACTTTTTCATCAACTAGCGGAAGTGGCACAAGCTCGTCCCATGGGAATTCCGTTAAAAAGCCATCTTCTCTGCTTGGCTTGCTAATGGAAATGCAACCAAAAGACTGCCTGGTGCACAAATCCCGTGCTAGAAGATTGACAGACACAGATAAAATAGTGATTATGTCTGGATTGATTGAAGGACTTCCTGACGCAGTTGCAATAAGGTGCCTTGCAAGGGTTCCCTTTTACCTCCACCCAAAGTTAGAGCTTGTCTCTCGCTCTTGGCGAGCAGCCATCCATAGCCTTGAACTATTTAAAGCACGACAGGAGGTTGGCTCATCTGAGGATCTGTTGTGTGTATGCGCTTTTGATCCAGAGAACCTTTGGCAGCTGTATGACCCTCTACGGGATCTTTGGATTACACTTCCTGTTCTTCCCTCAAAAATCAGACACCTGTCCCGCTTTGGTGCTGTTGCCACTGCTGGAAAGTTGTTTGTGATTGGTGGTGGAAGTGATGCTGTAGATCCTTTGACTGGTGATCAAGATGGGAGCTTTGCAACAAACGAAGTCTGGTCATATGACCCTGTAGTCCGGCAGTGGGCCCAACGGGCTTCCATGCTTGTCCCTCGTTCTATGTTCGCATGCTGTGTTTTGAATGGAAAGATAATTGTGGCCGGGGGCTTCACTAGCTACAGAAAATCAGTATCTCAAGCAGAGATGTATGACCCTGAAAAAGATGTGTGGATTCAAATGCCTAATCTTCATTGCGCCCATAATTCAGCTTGTTTAGGAGTAGTTATTGGAGGAAAGGTACACGTATTACATAAAGGGTTGTCAACAGTACAAGTTTTAGACAATGGAGGGGCTCCTGGGTGGACCGTTCAGGAAAGCGGGTGGCTCCAAGGTCCAATGGCGGTTGTTGGAGGTGCCCTTTATGTGATGAGCCATGGATTTATTATCAAGCAGGACAAAGGAGAGAGAAAGATAATGGGTTTAGCAAATGAGTTTCAAAGGAGAATCGGGTTTGGAATGATTGGGGTTGGTGATGATCTATATGTAATTGGAGGCGTTGTTGGCCCTGACGGGTTGAACTGGGACATAAATCCGTTGGCTGACGTTGATATTCTCACACCGCTTGGGAGTGACAGAACAACCTGGCGTCAGGCGTCTCCAATGTCACGGTGTCATGGTACTATCCTTGGTTGTACATTGCTGAGAATTTAG 2355 0.4764 MAFRVMILGLAVVLLASSLWTQTAAQLSCTSALTSMSPCLNYVTGSSSTPSSTCCSQLSSVVQSSPQCLCSVLNGGGSSLGITINQTLALSLPGACKVQTPPISQCKSAGNAPTTPSNAPAGSPVGSPEGSIAPSDSDVPNAGTGSKTVPRVDGGSSDGSTMKISFQRFHSPQPHPLLAALSFSVWFSHNQSDHALQHLVELLLSWALGSLPMLVMSKALPASQCKGFSYIIFQIGKVKLEPVCLSRKPIGITCFLSDPYIIGQDVNALWGFTVAQNDSSCTNVLISLSPCLDYVTGNASVPSSACCSQLASVVSSQPQCLCQVVNGAAASAVGINVNQTQALTLPSACRVQTPPLSICQASSPTTDSTATVTTSFPSGNGYSTFSSTSGSGTSSSHGNSVKKPSSLLGLLMEMQPKDCLVHKSRARRLTDTDKIVIMSGLIEGLPDAVAIRCLARVPFYLHPKLELVSRSWRAAIHSLELFKARQEVGSSEDLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLSRFGAVATAGKLFVIGGGSDAVDPLTGDQDGSFATNEVWSYDPVVRQWAQRASMLVPRSMFACCVLNGKIIVAGGFTSYRKSVSQAEMYDPEKDVWIQMPNLHCAHNSACLGVVIGGKVHVLHKGLSTVQVLDNGGAPGWTVQESGWLQGPMAVVGGALYVMSHGFIIKQDKGERKIMGLANEFQRRIGFGMIGVGDDLYVIGGVVGPDGLNWDINPLADVDILTPLGSDRTTWRQASPMSRCHGTILGCTLLRI 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1322 784 CDD AAI_LTSS 36 98 - -
Lele06g1322 784 PRINTS Plant phospholipid transfer protein signature 301 315 IPR000528 GO:0006869|GO:0008289
Lele06g1322 784 PRINTS Plant phospholipid transfer protein signature 280 296 IPR000528 GO:0006869|GO:0008289
Lele06g1322 784 PRINTS Plant phospholipid transfer protein signature 336 353 IPR000528 GO:0006869|GO:0008289
Lele06g1322 784 SMART aai_6 29 106 IPR016140 -
Lele06g1322 784 SMART aai_6 281 359 IPR016140 -
Lele06g1322 784 SMART kelc_smart 727 783 IPR006652 GO:0005515
Lele06g1322 784 SMART kelc_smart 598 645 IPR006652 GO:0005515
Lele06g1322 784 SMART kelc_smart 540 597 IPR006652 GO:0005515
Lele06g1322 784 SUPERFAMILY Kelch motif 498 754 IPR015915 GO:0005515
Lele06g1322 784 MobiDBLite consensus disorder prediction 107 157 - -
Lele06g1322 784 Gene3D - 501 780 IPR015915 GO:0005515
Lele06g1322 784 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 280 360 IPR036312 -
Lele06g1322 784 Pfam Kelch motif 530 583 IPR006652 GO:0005515
Lele06g1322 784 Pfam Kelch motif 586 631 IPR006652 GO:0005515
Lele06g1322 784 Pfam Kelch motif 715 770 IPR006652 GO:0005515
Lele06g1322 784 MobiDBLite consensus disorder prediction 137 157 - -
Lele06g1322 784 CDD AAI_LTSS 288 351 - -
Lele06g1322 784 Pfam Probable lipid transfer 19 106 IPR016140 -
Lele06g1322 784 Pfam Probable lipid transfer 276 359 IPR016140 -
Lele06g1322 784 Gene3D - 26 106 IPR036312 -
Lele06g1322 784 Gene3D - 279 356 IPR036312 -
Lele06g1322 784 MobiDBLite consensus disorder prediction 107 124 - -
Lele06g1322 784 SMART fbox_2 445 485 IPR001810 GO:0005515
Lele06g1322 784 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 27 107 IPR036312 -
Lele06g1322 784 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 26 105 - -
Lele06g1322 784 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 278 358 - -
Lele06g1322 784 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 12 150 IPR043325 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1322 Lele-ChrLele06 8469212 8477826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1322 268 402 Lipid Metabolism Gene Families AT3G22600 51.799 7.43e-34 125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1322 06 8469212 8477826 Lele06g1322 06 8469212 8477826 ECH
Lele06g1322 06 8469212 8477826 Lele07g1527 07 9404381 9409082 hybridization
Lele06g1322 06 8469212 8477826 Lele08g1317 08 8417459 8419112 hybridization