Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1196 ATGGGTGTGATCGGAAAACCTTCCTCTCTCCGCTCTGTGTTTCTCTCAACTGTTTTCGCTCTCCTTCTTCGTCGTATTTCAGCTGCGGATTTCACTGACTTGGTCTACAAGGGCTGTGCGGATCAGAAATTTCAAGACCCATCTGGGATTTACTCGCAGAACCTCAGGTCTTTACTCGGTACTCTCGTCGCACAATCCGCACAAAAGGTTTTCGCCTCTACAACCTCCGGCGACGGCCAGAATGCGATCATGGGTCTGTACCAATGCAGAGGAGACCTCTCAAACTCCGACTGCTACAAATGTGTGAGCAAGATTCCCGATATGCTCGACAAGCTTTGTGGCCAGGTTGTGGCGGCGCGTGTCCAGCTCAATGGGTGCTATTTGCGGTACGAGATCGTCGGGTTCAAGCAAGTCTCTGGGACTCAGTTGCTGTACAAGGTCTGTGGGTCGATTCAGGCGAGCGGAAGTGGGTTCACAGAGAGAAGAGAGACAGCGTTTGGGATGGTGGAAAATGGAGTGAAAAGTGGAGGAAGCTTGTTTTACACTGGGAGCTACCAGTCTCTGTATGTGTTGGGGCAGTGCGAAGGCGATTTGTCTAGTGGTGATTGTGGCGATTGTGTGAAGAGTGCTGAGGACCAGGCTAAATCTCTGTGTGGTTACTCAATTTCTGCCAAAGTTTATCTTCAAAAGTGCTATATCAGCTACAACTTTTATCCTAATGGAGTGCCTGGAAATGGCGAGTCACCATCTTCGTCCTCAGGAACGGGGCCGCACAATACACAGAAGACAGTGGCTCTTGCAGTAGGAGGGGTTGCAGCTCTGGGATTCTTGATCGCTTGTTTGTTATTTGTCAAATCAGCATTCAAGAAACGAGGTGGTTTCAACTTGTGGAATCTATGA 900 0.4944 MGVIGKPSSLRSVFLSTVFALLLRRISAADFTDLVYKGCADQKFQDPSGIYSQNLRSLLGTLVAQSAQKVFASTTSGDGQNAIMGLYQCRGDLSNSDCYKCVSKIPDMLDKLCGQVVAARVQLNGCYLRYEIVGFKQVSGTQLLYKVCGSIQASGSGFTERRETAFGMVENGVKSGGSLFYTGSYQSLYVLGQCEGDLSSGDCGDCVKSAEDQAKSLCGYSISAKVYLQKCYISYNFYPNGVPGNGESPSSSSGTGPHNTQKTVALAVGGVAALGFLIACLLFVKSAFKKRGGFNLWNL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1196 299 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 12 288 - -
Lele08g1196 299 ProSiteProfiles Gnk2-homologous domain profile. 140 240 IPR002902 -
Lele08g1196 299 Pfam Salt stress response/antifungal 42 131 IPR002902 -
Lele08g1196 299 Pfam Salt stress response/antifungal 178 237 IPR002902 -
Lele08g1196 299 Gene3D - 31 135 IPR038408 -
Lele08g1196 299 Gene3D - 141 239 IPR038408 -
Lele08g1196 299 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Lele08g1196 299 FunFam cysteine-rich repeat secretory protein 3 31 135 - -
Lele08g1196 299 FunFam cysteine-rich repeat secretory protein 3 141 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1196 Lele-ChrLele08 7549679 7551296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1196 12 239 Receptor kinase-like Gene Family AT4G05200 26.033 3.65e-15 73.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1196 08 7549679 7551296 Lele08g1196 08 7549679 7551296 ECH
Lele05g1340 05 8411642 8413288 Lele08g1196 08 7549679 7551296 hybridization
Lele06g1198 06 7549748 7556548 Lele08g1196 08 7549679 7551296 hybridization