Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1198 ATGGGTGTGATAGGAAAACCTTCCTCTCTCCGCTCTGTGTTTCTTTTCACTGTTTTCGCTCTCCTTCTTCGTCGTATTTCAGCTGCGGATTTCACTGACTTGGTTTACAAGGGCTGTGCGGATCAGAAATTTCAAGACCCATCTGGTATTTACTCGCAGAACCTCAGGTCTTTACAAGGTACTCTCGTCGCACAATCTGCACAAAAGGTTTTCGCCTCTACAACCTCCGGCGACGGCCAGAATGCGATCATGGGTCTGTACCAATGCAGAGGAGACCTCTCAAACTCCGACTGCTACAAATGTGTGAGCAAGATTCCCGATATGGTTGACAAGCTTTGTGGCCAGGTTGTGGCGGCGCGTGTCCAGCTCAATGGGTGCTATTTGCGGTACGAGATCGTCGGGTTCAAGCAAGTCTCTGGGACTCAGTTGCTGTACAAGGTCTGTGGGTCGATTCAGGCAAGCGGAAGTGGGTTCACAGAGAGAAGAGAGACAGCGTTTGGGATGGTGGAAAATGGAGTGAAAAGTGGAGGAAGCTTGTTTTACACTGGGAACTACCAGTCTCTGTATGTGTTGGGGCAGTGCGAAGGCGATTTGTCTAGTGGTGATTGTGGCGATTGTGTGAAGAGTGCTGAGGACCAGGCTAAATCTCTGTGTGGTTACTCAATTTCTGCCAAAGTTTATCTTCAAAAGTGCTATATCAGCTACAACTTTTATCCTAAAGGAGTGCCTGGAAATGGCGAGTCACCATCTTCGTCCTCAGGAACGGGGCCGCACAATACACAGAAGACAGTGGCTCTTGCAGTAGGAGGGGTTGCAGCTCTGGGATTCTTGATCGCTTGTTTGTTATTTGTTAAAGCAGCGTTCAAGAAACGAGGTGAAGACGTATTTGGATCTGAGCATTCCTCCATTGCCGTTGTTGTTCCTCGCCCTCACCGGTTCCGATCAAGAAGCTTGAAGTTTGAAAGAGAAATAAATGAAGTACGTGGATCCAGTTCCCTACAGATCAGGGCTAAAAGGTGTTTCTCATGTCCCAATCCCATTTTGCATGAGAAGAGGGGTACCGAGGAGGCTGGCCTGCTGGAGCTCGAGCTCGTTCAACTGCTGCTCGCGGTCCATCTCGATAATCAAGGGGACGACGAGGATGAGGAAGGTGGTGCCAGCGATCCAAGCGGCCTTACCGGTGCTCTTGAGGAGCTTCTTGGTGACGAAAGCGGCGTCGCCGACGACCACCTTGCCCTTGGAGACGAGAGGGGACTGTGA 1260 0.5048 MGVIGKPSSLRSVFLFTVFALLLRRISAADFTDLVYKGCADQKFQDPSGIYSQNLRSLQGTLVAQSAQKVFASTTSGDGQNAIMGLYQCRGDLSNSDCYKCVSKIPDMVDKLCGQVVAARVQLNGCYLRYEIVGFKQVSGTQLLYKVCGSIQASGSGFTERRETAFGMVENGVKSGGSLFYTGNYQSLYVLGQCEGDLSSGDCGDCVKSAEDQAKSLCGYSISAKVYLQKCYISYNFYPKGVPGNGESPSSSSGTGPHNTQKTVALAVGGVAALGFLIACLLFVKAAFKKRGEDVFGSEHSSIAVVVPRPHRFRSRSLKFEREINEVRGSSSLQIRAKRCFSCPNPILHEKRGTEEAGLLELELVQLLLAVHLDNQGDDEDEEGGASDPSGLTGALEELLGDESGVADDHLALGDERGL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1198 419 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Lele06g1198 419 Gene3D - 141 239 IPR038408 -
Lele06g1198 419 Gene3D - 31 135 IPR038408 -
Lele06g1198 419 ProSiteProfiles Gnk2-homologous domain profile. 140 240 IPR002902 -
Lele06g1198 419 MobiDBLite consensus disorder prediction 403 419 - -
Lele06g1198 419 MobiDBLite consensus disorder prediction 377 419 - -
Lele06g1198 419 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 10 287 - -
Lele06g1198 419 FunFam cysteine-rich repeat secretory protein 3 31 135 - -
Lele06g1198 419 Pfam Salt stress response/antifungal 42 131 IPR002902 -
Lele06g1198 419 Pfam Salt stress response/antifungal 180 237 IPR002902 -
Lele06g1198 419 FunFam cysteine-rich repeat secretory protein 3 141 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1198 Lele-ChrLele06 7549748 7556548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1198 12 239 Receptor kinase-like Gene Family AT4G05200 26.033 1.34e-15 77.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1198 06 7549748 7556548 Lele06g1198 06 7549748 7556548 ECH
Lele06g1198 06 7549748 7556548 Lele07g1395 07 8481847 8487115 hybridization
Lele06g1198 06 7549748 7556548 Lele08g1196 08 7549679 7551296 hybridization