Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1179 ATGACGGGATTTCCTCGGCCTAATGATCAGACCCCACCTTCTTCCTCGTCTTCCTACAGTTCCAACAGCAGTGGAAAAAATGTATTTAATTTGCTAGCGCATAGAGAGATTTCTGCAAGATCAAAACAAGTGTCAAAACAGCACTGGGGAGAAGCTTCTGAACCAAAAACTGGTTCTTGCCCTCATCCTAAATATGATGCAGTGCAAGATTCGAAACGCAGTCTCCTTTCATGGGTTGAGGCAGAGTCATTGCGGCATTTATCAGCTAAATATTGTTCCCTGTTGCCTCCCCCACGATCTACTATTGCAGCAGCATTTAGTCCAGATGGAAAAGTGCTTGCATCAACGCATGGTGACCACACCGTAAAGATAATTGATTGGGAAACTGGAAGTTGCTTAAATGTGTTAATTGGCCATAGAAGGACCCCTTGGGTGGTTAGGTTCCATCCATTGCAACCACATATACTTGCTAGTGGGAGCTTGGATCAAGAAGTTCGCTTATGGGATGCTAACACATCAAAATGCATTTTATTCCACCATTTCTATCGCCCCATCGCATCCATTGCTTTTCATGCTGAAGGGGAAATACTTGCGATTGCATCAGGCCACAAGCTGTACATATGGCACTACAACAAGAGAGGTGAAGGATCCTCACCAACATTTGTGTTGAAGACAAGGCGTTCACTTCGGGCTGTTCACTTTCACCCGCATGGAGCACCATATCTTTTAACTGCTGAGGTCAATGATCTTGACTCTTCAGATTCCTCAATGACACGGGCTACATCTCCTGGTTATTTACAATATCCTCCACCTGCTGTGATTGTTGCAAATATTCATTATAAGGAACATATTGCTTTTCCCAGCAGTGAACTACCTTATTTGTCGTTACCTTTTTTCTTTTTGCCTTCATTTAATGGTGATGATTCAAGAACGGAAACATGTAATGCTGGTCTTGTTGCTGGTTCGGAGAACATACAAGTTGAATCTTCCGCATCAGCACAGTTTCAAGCAGTCACAAATGCTACTGAGCAATATAATAATACAGTGTCTCCCATGGATACAGTCTCTGAGATTCCTACTAGCTCTCAAACTTGTACAGAATACGCTGTCCATGGTACCTTCTCTAATGGAATGGGAACTGGTATCGGTAACCTTGCTGTGGATGGTATGGAGACTGATGAAACAGGACCAGCTGAAGGAAGCCAGCATGGAAACTCTACAAATGTCTATTCCCTGAGTAATGTCCTGCATGGTTTATACAGACAAACAACAAATCATGAGGGTCTTTCTGACATGGGTCAATTTCACCATTTTTCCCCCTCAAGAGACCCAAGTGGATGGGAGCTACCCTTTCTGCAAGGATGGTTAATTGGTCAAAGCCAAGCTGGTGTCCCCTTGATGCTTCCTCATCTGAGTGGTAGTCGAGACAGCCTAGCTCAGATTGGTTCTTCCACCATGGCATCTAATTTGTCCCCTCATGATGATGAAGCAACAACTTCATCTACAGCTATTCCAGGAAGCACTTGCATACCAGGACCTCAAGGGAGATCTGGTTTGCGGAGTCATTTTCCACAATCTCAAGTTCCTGCATCTGAATCTGGCAATATGGCCCCTTCCATCAATATCCCGCATGGTGGTACTGACATTCAAACCATTATAAGTCGGATTCATTCTGAACTTGCCACATCAGTGGCTGCAGCTGCTGCTGCAGAGCTGCCTTGCACGGTGAAGCTAAGAGTATGGTCACTTGACATAAAAAATCCCTGTGCCCCACTAAATGCTGAAAGATGCCGTCTTACAATACCACATGCCGTCTTGTGCAGTGAAATGGGTGCCCATTTTTCACCATGTGGTAGGTTTCTGGCTGCCTGTGTGGCATGCATGCTTCCTCATGTAGAAGCTGATTCAGGATTACAAACTCAAGTACAACATGAGTCGGTAGTTGCAACATCCCCAACAAGACATCCAATCTCTGCTCACCAAGTTATGTACGAGCTTCGCATATATTCCCTTGAGGAGGCAACATTTGGAATGGTGCTTGCATCACGGGCAATTAGAGCAGCTCACTGTTTGACTTCAATCCAGTTCTCACCCGCATCTGAGCACATACTGCTTGCCTATGGTAGACGTCATGGATCTCTTCTTAAAAGCATTGTTATCGATGGAGAAACAACCCTGCCTATATATACTGTGTTAGAGGTATATAGAGTGTCAGATATGAAAATCGTCATGGTGCTTCCTAGTGCAGAGGATGAGGTCAATGTAGCATGCTTTCATCCTTTTCCTGGGAGAGGGCTTGTTTATGGAACTAAGGAAGGAAAGCTTCGGGTCCTCCACTATGATGGAGCTCATGCGGTAAATGGCCCTAAAGCAAGTTACTTACCTGAGGACAACATTATTGGAGTCAACTGA 2412 0.4465 MTGFPRPNDQTPPSSSSSYSSNSSGKNVFNLLAHREISARSKQVSKQHWGEASEPKTGSCPHPKYDAVQDSKRSLLSWVEAESLRHLSAKYCSLLPPPRSTIAAAFSPDGKVLASTHGDHTVKIIDWETGSCLNVLIGHRRTPWVVRFHPLQPHILASGSLDQEVRLWDANTSKCILFHHFYRPIASIAFHAEGEILAIASGHKLYIWHYNKRGEGSSPTFVLKTRRSLRAVHFHPHGAPYLLTAEVNDLDSSDSSMTRATSPGYLQYPPPAVIVANIHYKEHIAFPSSELPYLSLPFFFLPSFNGDDSRTETCNAGLVAGSENIQVESSASAQFQAVTNATEQYNNTVSPMDTVSEIPTSSQTCTEYAVHGTFSNGMGTGIGNLAVDGMETDETGPAEGSQHGNSTNVYSLSNVLHGLYRQTTNHEGLSDMGQFHHFSPSRDPSGWELPFLQGWLIGQSQAGVPLMLPHLSGSRDSLAQIGSSTMASNLSPHDDEATTSSTAIPGSTCIPGPQGRSGLRSHFPQSQVPASESGNMAPSINIPHGGTDIQTIISRIHSELATSVAAAAAAELPCTVKLRVWSLDIKNPCAPLNAERCRLTIPHAVLCSEMGAHFSPCGRFLAACVACMLPHVEADSGLQTQVQHESVVATSPTRHPISAHQVMYELRIYSLEEATFGMVLASRAIRAAHCLTSIQFSPASEHILLAYGRRHGSLLKSIVIDGETTLPIYTVLEVYRVSDMKIVMVLPSAEDEVNVACFHPFPGRGLVYGTKEGKLRVLHYDGAHAVNGPKASYLPEDNIIGVN 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1179 803 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 136 174 - -
Lele08g1179 803 FunFam Activating molecule in BECN1-regulated autophagy protein 83 263 - -
Lele08g1179 803 Gene3D - 80 261 IPR015943 GO:0005515
Lele08g1179 803 ProSiteProfiles Trp-Asp (WD) repeats profile. 136 178 IPR001680 GO:0005515
Lele08g1179 803 ProSitePatterns Trp-Asp (WD) repeats signature. 156 170 IPR019775 -
Lele08g1179 803 MobiDBLite consensus disorder prediction 513 532 - -
Lele08g1179 803 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 25 798 - -
Lele08g1179 803 MobiDBLite consensus disorder prediction 39 66 - -
Lele08g1179 803 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 97 781 IPR011047 -
Lele08g1179 803 SMART WD40_4 739 779 IPR001680 GO:0005515
Lele08g1179 803 SMART WD40_4 172 209 IPR001680 GO:0005515
Lele08g1179 803 SMART WD40_4 88 126 IPR001680 GO:0005515
Lele08g1179 803 SMART WD40_4 129 169 IPR001680 GO:0005515
Lele08g1179 803 Pfam WD domain, G-beta repeat 103 126 IPR001680 GO:0005515
Lele08g1179 803 Pfam WD domain, G-beta repeat 130 169 IPR001680 GO:0005515
Lele08g1179 803 MobiDBLite consensus disorder prediction 486 506 - -
Lele08g1179 803 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1179 Lele-ChrLele08 7445898 7452387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1179 89 242 Miscellaneous Gene Families AT5G08390 30.247 3.53e-08 55.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1179 08 7445898 7452387 Lele08g1179 08 7445898 7452387 ECH
Lele05g1326 05 8311982 8319195 Lele08g1179 08 7445898 7452387 hybridization
Lele06g1187 06 7450230 7456774 Lele08g1179 08 7445898 7452387 hybridization