Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1326 ATGACGGGATTTCTTCGGCCTAATGATCAGACCCCACCTTCGTCCTCCTCTTCCTACAGTTCCAACAGCAGTGGAAAAAATGTATTTAATTTGCTAGCGCACAGAGAGATTTCAAGATCAAAACAAGTGCCAAAACAGCACTGGGGAGAAGCTTCTGAACCAAAAACTGGTTCTGGCCCTGGTCCTAAAAATGATGCAGTGAGAGATTCAAAATGCAGCTTCCTCTCATGGGTTGAGGCAGAGTCATTGCGGCATTTATCAGCTAAATATTGTCCCTTGTTGCCTCCCCCACGCTCCACTATTGCAGCAGCATTTAGTCCAGATGGAAAAGTGCTTGCATCGACACATGGTGACCATACCGTAAAGATAATTGATTGGGAAACTGGAAGTTGCTTAAATGTGTTAATTGGCCACAGAAGGACCCCTTGGGTGGTTAGGTTCCATCCATTGCAACCGCATATACTTGCTAGTGGGAGCTTGGATCAAGAAGTTCGCTTATGGGATGCTAACACATCAAAATGCATTTTATTTCACCATTTCTATCGCCCCATTGCATCCATTGCTTTTCATGCCGAAGGGGAAATACTTGCAATTGCCTCAGGTCACAAGCTGTACATATGGCACTACAACAAGAGAGGTGAAGAATCCTCACCAACATTTGTGTTGAAGACAAGGCGTTCACTTCGGGCTGTTCACTTTCACCCGCATGCAGCACCATATCTTTTAACAGCTGAGGTCAATGATCTTGACTCTTCAGATTCCTCAATGACACAGGCTACATCTCCTGGTTATTTACAATATCCTCCACCTGCTGTGATTGTTACAAATATTCATTTTAAGGAACATATTGCTTTTCCCAGCAGTGAACTACATTATTTGTCGTTGCCTTTTTTCTTCTTGCCTTCATTTAATGGTGATGACTCAAGAATGGAAACACATAATGCTAGTCTCGTTGCTGGTTCAGAGAACATGCAATTTGAATCTTCTGCATCAGCACAGTTTCAAGCAGTCACAAATGCTACTGAGCAATATAATAATACAGTGTCTCCCATGGATACAGTCTCCGAGATTCCTACTAGCTTTCAAACTGGTACAGAATACGTGGTCCTTAGTTCCTTCTCTAATGGAATGGGAACTGGTATCAGTAACCTTGCTGTGAATAGTATGGAGACTGACGAAACAGTAGCAGCTGAAGGAAGCGAGAATGGAAACTCTACAAATGTCTATTCTCTGAGTAATTTGCTGCATGGTTTATACAGACAAACAACGAATCATGAGGGTCTTTCTGACGTGGGTCAATTTCACCGTTTTTTCCCCTCAAGAGACCCAAGTGGATGGGAGCTACCCTTTCTGCAAGGATGGTTAATGGGTCAAAGCCAAGTTGGGGTCCCCTTAGTGCTTCCTCATCTGAGTGGTAGTCAGGACAGTCTAGCTCAGATCGGGTCTTCCACCATGGCATCTAATTTGTCCCCTCATGATGATGAAGCAACAACTTCATCTTCAGCTATTCCAGGAAGCACGAGTATACCAGGAGCTCAGGGGAGATCTGGTTTGCGGAGTCATTTTCCACAATCTCAAGTTCCTACATCTGAATCTGGCAATATGGCCTCTTCCATTAATAGCCCGCAAGGTGGAACTGACATTCAAACCATTATAAGTCGGATTCAGTCAGAACTTGCCACATCAGTGGCTGCAGAGCTGCCTTGCACAGTGAAGCTAAGAGTATGGTCTCATGACATAAAAAATCCCTGTGCCCTACTAAATACTGAAAGATGCCGTCTTACAATACCACATGCCGTCTTATGCAGTGAAATGGGTGCCCATTTTTCACCATGCGGTAGGTTTCTGGCTGCATGTGTTGCATGCATGCTTCCTCATGTAGAAGCTGATTCAGGATTACAAACTCAAGTACAACATGAGTCAGGAGTTGCAACATCCCCAACAAGACATCCAATCTCCGCTCACCAAGCTATGTACGAGCTTCGCATATATTCCCTTGAGGAGGCAACATTTGGAATGGTGCTTGCGTCACGGGCAATTAGAGCAGCTCACTGTCTGACTTCAATCCAGTTCTCACCCACCTCTGAGCACATACTGCTTGCCTATGGTAGACGTCACGGATCTCTTCTTAAAAGCATTGTTATCGATGGAGAAACAACCCTGCCTATATATACCGTGTTAGAGGTATACAGAGTGTCAGATATGAAACTCGTCATGGTGCTTCCTAGTTCAGAGGATGAGGTCAATGTAGCATGCTTTCATCCTTTTCCTGGGAGAGGGCTTGTTTATGGAACTAAGGAAGGAAAGCTTAGGGTCCTTCACTATGATGGAGCTCATGCAGTAAATGGCACTAAAGCAAGTTACTTACCTGAGGACAACATTATTGGAGTCAACTAA 2397 0.4431 MTGFLRPNDQTPPSSSSSYSSNSSGKNVFNLLAHREISRSKQVPKQHWGEASEPKTGSGPGPKNDAVRDSKCSFLSWVEAESLRHLSAKYCPLLPPPRSTIAAAFSPDGKVLASTHGDHTVKIIDWETGSCLNVLIGHRRTPWVVRFHPLQPHILASGSLDQEVRLWDANTSKCILFHHFYRPIASIAFHAEGEILAIASGHKLYIWHYNKRGEESSPTFVLKTRRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTQATSPGYLQYPPPAVIVTNIHFKEHIAFPSSELHYLSLPFFFLPSFNGDDSRMETHNASLVAGSENMQFESSASAQFQAVTNATEQYNNTVSPMDTVSEIPTSFQTGTEYVVLSSFSNGMGTGISNLAVNSMETDETVAAEGSENGNSTNVYSLSNLLHGLYRQTTNHEGLSDVGQFHRFFPSRDPSGWELPFLQGWLMGQSQVGVPLVLPHLSGSQDSLAQIGSSTMASNLSPHDDEATTSSSAIPGSTSIPGAQGRSGLRSHFPQSQVPTSESGNMASSINSPQGGTDIQTIISRIQSELATSVAAELPCTVKLRVWSHDIKNPCALLNTERCRLTIPHAVLCSEMGAHFSPCGRFLAACVACMLPHVEADSGLQTQVQHESGVATSPTRHPISAHQAMYELRIYSLEEATFGMVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTLPIYTVLEVYRVSDMKLVMVLPSSEDEVNVACFHPFPGRGLVYGTKEGKLRVLHYDGAHAVNGTKASYLPEDNIIGVN 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1326 798 MobiDBLite consensus disorder prediction 1 29 - -
Lele05g1326 798 ProSitePatterns Trp-Asp (WD) repeats signature. 155 169 IPR019775 -
Lele05g1326 798 Gene3D - 86 259 IPR015943 GO:0005515
Lele05g1326 798 Pfam WD domain, G-beta repeat 129 168 IPR001680 GO:0005515
Lele05g1326 798 Pfam WD domain, G-beta repeat 102 125 IPR001680 GO:0005515
Lele05g1326 798 ProSiteProfiles Trp-Asp (WD) repeats profile. 135 177 IPR001680 GO:0005515
Lele05g1326 798 MobiDBLite consensus disorder prediction 484 544 - -
Lele05g1326 798 MobiDBLite consensus disorder prediction 1 66 - -
Lele05g1326 798 SUPERFAMILY WD40 repeat-like 99 772 IPR036322 GO:0005515
Lele05g1326 798 SMART WD40_4 734 774 IPR001680 GO:0005515
Lele05g1326 798 SMART WD40_4 87 125 IPR001680 GO:0005515
Lele05g1326 798 SMART WD40_4 171 208 IPR001680 GO:0005515
Lele05g1326 798 SMART WD40_4 128 168 IPR001680 GO:0005515
Lele05g1326 798 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 25 794 - -
Lele05g1326 798 FunFam Activating molecule in BECN1-regulated autophagy protein 82 262 - -
Lele05g1326 798 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 135 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1326 Lele-ChrLele05 8311982 8319195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1326 102 236 Miscellaneous Gene Families AT5G08390 24.823 1.27e-06 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1326 05 8311982 8319195 Lele05g1326 05 8311982 8319195 ECH
Lele05g1326 05 8311982 8319195 Lele07g1376 07 8372810 8379385 hybridization
Lele05g1326 05 8311982 8319195 Lele08g1179 08 7445898 7452387 hybridization