Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1128 ATGTGCCAGCAAGAGCAACAACCCCAGAAGGCCAAGAAGAAGTCATCCTCAAAGCCAAGGGACGAGAACAAGAGGAACTTAAGGAAGGGTCATGATCAGAGGAAGAAAAGTGCTGCAGGAAGGCTCACTGAACATATCACAAACAGTTACTCTTCAAAGCCAATTGAAAGTGTTCTTCGAAGAAGCTGGGTTAGGCGACCTCCTGATTTGATCACTCCTCCAAGTTCTTCCAGATATTTGCTTACTGAGACTTCCGTATCGGATGGCTGGCCCAACTATGACCCTGTTTTGGCCTTGACTCCGTTTGATTATAACAACCAGAAGTCTCAATCTGTCGTGGTGTTGAGGGTTTCTCTGTGCAGAGGCTGTGAAGGAAAACTCAGGAAACATCTCTACAGAATGGAAGGAGTGAGATCGTTCAACATAGATTTTGCAGCGAAGAAGGTGACAATAGTTGGAGACGTGACTCCACTAAGTGTATTGGCAAGTGTGTCTAAGGTGAAGAACGCACAATTCTGGCCAGTACCTGCAACACCAACAGCTGAAATTAGGAAGTGA 558 0.4588 MCQQEQQPQKAKKKSSSKPRDENKRNLRKGHDQRKKSAAGRLTEHITNSYSSKPIESVLRRSWVRRPPDLITPPSSSRYLLTETSVSDGWPNYDPVLALTPFDYNNQKSQSVVVLRVSLCRGCEGKLRKHLYRMEGVRSFNIDFAAKKVTIVGDVTPLSVLASVSKVKNAQFWPVPATPTAEIRK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1128 185 MobiDBLite consensus disorder prediction 11 28 - -
Lele08g1128 185 CDD HMA 120 166 IPR006121 GO:0046872
Lele08g1128 185 ProSiteProfiles Heavy-metal-associated domain profile. 120 167 IPR006121 GO:0046872
Lele08g1128 185 Gene3D - 108 171 - -
Lele08g1128 185 SUPERFAMILY HMA, heavy metal-associated domain 120 167 IPR036163 GO:0046872
Lele08g1128 185 PANTHER OS08G0405700 PROTEIN 20 180 IPR044526 -
Lele08g1128 185 MobiDBLite consensus disorder prediction 1 47 - -
Lele08g1128 185 Pfam Heavy-metal-associated domain 119 165 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1128 Lele-ChrLele08 7075715 7077005 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1275 05 7943409 7944466 Lele08g1128 08 7075715 7077005 hybridization
Lele06g1138 06 7069399 7070455 Lele08g1128 08 7075715 7077005 hybridization