Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1275 ATGAAAGGCATAGAAATCTTCTGTGCTTCGCCAGCCTCAACAGCCATATGTGTTAGTATGGATGGAGCCTCGTCTTCGTCGTCTTCCTCTTCTAAATCTGTTCAACTTGGTGGCCGAGCCATTGATCGCCACAACCCCATTATCAGAGATTCAAGAAGAGCACCGTGTGCTTCTCCTTCGTCTTCGCCTCTGCCACCAAAAGATCCAAAACCTCAGGAGCAACCCCAGAAGGCCAAGAAGAACTCATCTTCTTCAAAGCCAAGGGACGAGAACAAGAGGAACTCAAGGAAGGGTCATGATCAGAGGAAGAAAAGTGCTGCAGGAAGGCTCACTGAACATATCACAAACAGTTACTCTTCAAAGCCAGTTGAAAGTGTTCTTCGAAGAAGCTGTGTTAGGCCACCTTCTGATTTGATCACTCCTCCAGGTTCTTCCAGATATTTGCTTACTGAGACTTCCGTATTGGATGGCTTGCCCAACTATGACCCTGTTTTGGCCTTGACCCCATTTGATGATAACAACCAGAAGTCTCAATCTGTTCATCAATATGAAACCAATCATACTTCTAAACCCTCTAAGTCTTCTCTCTCAAGACCTGCTTCCTCAGACCAGGTGGTGGTATTGAGGGTTTCTCTGCACTGCAGAGGTTGTGAAGGAAAACTCAGGAAACATCTCTCCAGAATGGAAGGAGTTACATCGTTCAACATAGATTTTGCAGCGAAAAAGGTGACAATAGTTGGAGACGTGACTCCACTGAGTGTATTGGCAAGTGTGTCGAAGGTGAAGAATGCACAATTCTGGCCAGTACCTGCGACACCAACAATTTCGGGTACAACTGAAATTAGGAAGTGA 852 0.4577 MKGIEIFCASPASTAICVSMDGASSSSSSSSKSVQLGGRAIDRHNPIIRDSRRAPCASPSSSPLPPKDPKPQEQPQKAKKNSSSSKPRDENKRNSRKGHDQRKKSAAGRLTEHITNSYSSKPVESVLRRSCVRPPSDLITPPGSSRYLLTETSVLDGLPNYDPVLALTPFDDNNQKSQSVHQYETNHTSKPSKSSLSRPASSDQVVVLRVSLHCRGCEGKLRKHLSRMEGVTSFNIDFAAKKVTIVGDVTPLSVLASVSKVKNAQFWPVPATPTISGTTEIRK 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1275 283 MobiDBLite consensus disorder prediction 20 126 - -
Lele05g1275 283 MobiDBLite consensus disorder prediction 168 200 - -
Lele05g1275 283 MobiDBLite consensus disorder prediction 82 96 - -
Lele05g1275 283 CDD HMA 207 260 IPR006121 GO:0046872
Lele05g1275 283 Pfam Heavy-metal-associated domain 208 259 IPR006121 GO:0046872
Lele05g1275 283 MobiDBLite consensus disorder prediction 170 200 - -
Lele05g1275 283 Gene3D - 201 265 - -
Lele05g1275 283 PANTHER OS08G0405700 PROTEIN 6 274 IPR044526 -
Lele05g1275 283 MobiDBLite consensus disorder prediction 110 124 - -
Lele05g1275 283 MobiDBLite consensus disorder prediction 20 36 - -
Lele05g1275 283 ProSiteProfiles Heavy-metal-associated domain profile. 204 261 IPR006121 GO:0046872
Lele05g1275 283 SUPERFAMILY HMA, heavy metal-associated domain 204 261 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1275 Lele-ChrLele05 7943409 7944466 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1275 05 7943409 7944466 Lele07g1322 07 7982178 7983236 hybridization
Lele05g1275 05 7943409 7944466 Lele08g1128 08 7075715 7077005 hybridization