Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1138 ATGAAAGGCATAGAAATCTTCTGCACTTCTCAAGCCTCAACAGCCATATGTGTTAGTATGGATAAAGCCTCGTCTTCTAAATCTGTTGAACTTGGTGGCCGAGCCATCGATCGCCACAACCCCATTATCAGAGATTCAAGAAGAGCGCCGTGTGCTTCTCCTTCGACTTCGCCTCTGCCGCCAAAAGATCCAAAACCTGAGGAGCAACAACCCCAAAAGGCCAAGAAGAATTCATCCTCAAAGCCAAGGGACGAGAACAAGAGGAACTCAAGGAAGGGTCATGATCAGAGGAAGAAAAGTGCTGCAGGAAGGCTCACTGAACATATCACAAACATTTACTCTTCAAAGCCAATTGAAAGTGTTCTTCGAAGAAGCTGGGTTAGGCCACCTCCTGATTTGATCACTCCTCCAAGTTCTTCGAGATATTTGCTTACTGAGACTTCCGTATTGGATGGCTTGCCCAACTATGACCCTGTTTTGGCCTTGACTCCGTTTGATTATAACAACCAGAAGTCTCAATCTGTTCATCAGCATAAAACCAATCATACTTCTAAACCCTCTACGTCTTCTCTTTCAAGACCTGCTTCCTCAGACCAGGTGGTGGTGTTGAGAGTTTCTCTGCACTGCAGAGGCTGTGAAGGAAAACTCAGGAAACATCTCTCCAGAATGGAAGGAGTTAGATCGTTCAACATAGATTTTGCAGCGAAGAAGGTGACAATAGTTGGAGACGTGACGCCATTGAGTTTATTGGCAAGTGTGTCAAAGGTGAAGAACGCACAATTCTGGCCAGTACCTGCAACACCAACAGCTGAAATTAGGAAGCGAGATTAA 831 0.4537 MKGIEIFCTSQASTAICVSMDKASSSKSVELGGRAIDRHNPIIRDSRRAPCASPSTSPLPPKDPKPEEQQPQKAKKNSSSKPRDENKRNSRKGHDQRKKSAAGRLTEHITNIYSSKPIESVLRRSWVRPPPDLITPPSSSRYLLTETSVLDGLPNYDPVLALTPFDYNNQKSQSVHQHKTNHTSKPSTSSLSRPASSDQVVVLRVSLHCRGCEGKLRKHLSRMEGVRSFNIDFAAKKVTIVGDVTPLSLLASVSKVKNAQFWPVPATPTAEIRKRD 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1138 276 MobiDBLite consensus disorder prediction 171 196 - -
Lele06g1138 276 Gene3D - 196 260 - -
Lele06g1138 276 SUPERFAMILY HMA, heavy metal-associated domain 199 256 IPR036163 GO:0046872
Lele06g1138 276 PANTHER OS08G0405700 PROTEIN 6 269 IPR044526 -
Lele06g1138 276 MobiDBLite consensus disorder prediction 66 91 - -
Lele06g1138 276 MobiDBLite consensus disorder prediction 23 108 - -
Lele06g1138 276 ProSiteProfiles Heavy-metal-associated domain profile. 199 256 IPR006121 GO:0046872
Lele06g1138 276 CDD HMA 202 255 IPR006121 GO:0046872
Lele06g1138 276 Pfam Heavy-metal-associated domain 203 255 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1138 Lele-ChrLele06 7069399 7070455 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1138 06 7069399 7070455 Lele07g1322 07 7982178 7983236 hybridization
Lele06g1138 06 7069399 7070455 Lele08g1128 08 7075715 7077005 hybridization