Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0905 ATGAGCAGCGAACTCAGCGAAGGAACGAGTGAACAGCAGTGTGTGCTCCACGGAATTTCAAGAATCCAAGCCCGACAAGGCAAAGTTTTTGGCTCCAATGAAGAGCCAGGACGAGACGTGGATCAGAATCACTTGGTCTTGTTCGGCTTTGCTCACAGCATGGATCAGAATGCCCAACTGCGTCGCTACCTTTTCAAGCTTAGTGCTAAGCAGATTTCCCAGGCAAAGCTCTCGGGTCTTATCCCTCATGATTTGCTAGTTGACCATTTTGCTGGTGGAGCAGTTCTAAATGCACATCGGGTACAACAGAGTTTGGATTCTTTATTGGTTTCCTATTGGGTTTGTAACCTTCACGCCCTGCTTCTCTTCCTCATCCATCACTATCTCATTTCTTCTCTCGCCCTATTCAAAACTCTTTCTTCCATAATGAGTACCCCAAAGTGTCTCATAGTTTCTTTTGTACTTTGCCTCCTCCTTCTGATTATTAACAATAATGCAGTTGATGCGTTTCATGATACATACCCACTTCTTCAATCCGTTTCAGCCACTAGGGTGAATCAACTTCGCAGAACTGGCTATCACTTTCAACCTCCTAAGCACTGGATCAACGATCCAAATGGACCTATGTATTACAAGGGATACTACCACCTATTCTACCAGTACAACCCTAAAGGAGCAGTGTGGGGAAATATAGTGTGGGCCCACTCCGTATCAAAGGACCTAATCAATTGGGAAACCATTGAACCGGCCATTTACCCCTCCAAACCGTTTGACAAGTACGGGTGTTGGTCCGGTTCAGCCACCATTGTTCCGGGCAAAGGACCAGTGATCCTCTACACTGGAGTTGCCGATGAAAAACAAACGCAGGTCCAATGCTATGCAGTACCGGAGAACGTATCCGACCCGTATCTCAGGAAATGGGTGAAGCCAGACTCCATCAACCCGCTGGTTGTTGCAGACATCGGCGTCAACGGCAGCGCTTTCCGTGACCCGACGACAGCGTGGTGGAGCAAGAGGGACGGTCACTGGAGGATCCTGGTCGGCGGGAGGAGGGGGCTAACAGGAGTAGCCCATCTATATAGAAGCAGGGACTTCGTGAATTGGGTCAAAGCCAAACACCCGATCCATTCTTCAGCAACGACGGGTATGTGGGAATGCCCCGACTTCTACCCGGTTCCAGTGAGAGGCAAACAAGGGCTGGACACATCGGTGGTGGGGAAAAACGTGAAGCACGTGTTGAAAAATAGCCTCGACATGACGAGGTTTGAATACTACACAATCGGAAAGTACATCGCGGAGCAGGATAGGTATATCCCGGAGAACACCTCGGAGGATGGCTGGGGTGGCCTCCGGTATGATTACGGTAACTTCTATGCTTCCAAGTCATTCTTCGATCCCGTCAAGAAACGAAGGGTCCTGTGGGGTTGGGCAAACGAGTCTGATTGTAGGGTTGATGATGTCAGAAAAGGGTGGGCTGGAATTCAGGGAATCCCGAGAACAGTGTGGCTTGATTCGAACGGGAAACAATTGGTTCAATGGCCGGTGGCAGAATTGAACAGTCTTAGAGGGAAGCAAGTTCAGCTGAGCAACAAGAGGCTTCGAAAGGGAGAATATGAGGAAGTAAGAGGAATTACAGCTGCCCAGGCTGACGTGGAAGTGACGTTTTCGTTTTCAAGGTTGGACAAGGCAGAAGAGTTTGATCCGAAGTGGGTGAACGCACAGGATCTGTGCGCTGAAAAGGGGTCAAAGGTTGAAGGTGGGGTTGGACCATTTGGGCTCCTCACTTTGGCATCTAAGAACCTGGAAGAGTTCACTCCTGTGTTTTTCAGAATTTTCAGGTCTCCAAACAAGCACGTGGTTCTCTTATGTTCTGATGCATCCAGTTCATCTCTGAGGAGTCGTGTGTACAAGCCATCGTTTGCTGGTTTTGTGGACGTGGATTTAGCGGATAAGAAGCTCTCTCTTAGGAGTCTGATTGATCACTCGGTGGTGGAAAGTTTTGGAGCAGGAGGGAGAACAAACATACTGTCAAGGGTTTATCCAGAATTGGCCGTAGCTGATGCGGCCCACCTGTTCGTCTTCAATAACGGTACTGAGCCCATCCATGTGGAGAATCTCAAGGCTTGGACAATGAAATCTGCTCTTCGGAACTAA 2154 0.4893 MSSELSEGTSEQQCVLHGISRIQARQGKVFGSNEEPGRDVDQNHLVLFGFAHSMDQNAQLRRYLFKLSAKQISQAKLSGLIPHDLLVDHFAGGAVLNAHRVQQSLDSLLVSYWVCNLHALLLFLIHHYLISSLALFKTLSSIMSTPKCLIVSFVLCLLLLIINNNAVDAFHDTYPLLQSVSATRVNQLRRTGYHFQPPKHWINDPNGPMYYKGYYHLFYQYNPKGAVWGNIVWAHSVSKDLINWETIEPAIYPSKPFDKYGCWSGSATIVPGKGPVILYTGVADEKQTQVQCYAVPENVSDPYLRKWVKPDSINPLVVADIGVNGSAFRDPTTAWWSKRDGHWRILVGGRRGLTGVAHLYRSRDFVNWVKAKHPIHSSATTGMWECPDFYPVPVRGKQGLDTSVVGKNVKHVLKNSLDMTRFEYYTIGKYIAEQDRYIPENTSEDGWGGLRYDYGNFYASKSFFDPVKKRRVLWGWANESDCRVDDVRKGWAGIQGIPRTVWLDSNGKQLVQWPVAELNSLRGKQVQLSNKRLRKGEYEEVRGITAAQADVEVTFSFSRLDKAEEFDPKWVNAQDLCAEKGSKVEGGVGPFGLLTLASKNLEEFTPVFFRIFRSPNKHVVLLCSDASSSSLRSRVYKPSFAGFVDVDLADKKLSLRSLIDHSVVESFGAGGRTNILSRVYPELAVADAAHLFVFNNGTEPIHVENLKAWTMKSALRN 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0905 717 Pfam Glycosyl hydrolases family 32 N-terminal domain 194 514 IPR013148 -
Lele08g0905 717 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 156 714 - -
Lele08g0905 717 SUPERFAMILY Concanavalin A-like lectins/glucanases 514 714 IPR013320 -
Lele08g0905 717 CDD GH32_Fruct1-like 200 503 - -
Lele08g0905 717 Pfam Glycosyl hydrolases family 32 C terminal 517 709 IPR013189 -
Lele08g0905 717 SMART glyco_32 194 671 IPR001362 GO:0004553|GO:0005975
Lele08g0905 717 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 198 526 - -
Lele08g0905 717 SUPERFAMILY Arabinanase/levansucrase/invertase 185 515 IPR023296 -
Lele08g0905 717 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 526 711 - -
Lele08g0905 717 Gene3D Glycosyl hydrolase domain; family 43 199 527 IPR023296 -
Lele08g0905 717 ProSitePatterns Glycosyl hydrolases family 32 active site. 194 207 IPR018053 GO:0004553|GO:0005975
Lele08g0905 717 Gene3D - 528 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0905 Lele-ChrLele08 5726059 5735803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0905 163 716 Glycoside Hydrolase AT2G36190 63.958 0.0 742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0905 08 5726059 5735803 Lele08g0905 08 5726059 5735803 ECH
Lele05g1057 05 6575947 6585967 Lele08g0905 08 5726059 5735803 hybridization
Lele06g0916 06 5692738 5696562 Lele08g0905 08 5726059 5735803 hybridization