Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0916 ATGAGTCCCCCAAAGTGTCTCATAGTTTCTTTTGTACTTTGCCTCCTCCTTCTGACTATTAACAATAATGCAGTTGAAGCGTTTCATGATACATACCCACTTCTTCAATCCGTTTCAGCCACTAGGGTGAATCAACTTCGCAGAACTGGCTATCACTTTCAACCTCCTAAGCACTGGATCAACGATCCAAATGGACCTATGTATTACAAGGGATACTACCACCTATTCTACCAGTACAACCCTAAAGGAGCAGTGTGGGGAAATATAGTGTGGGCCCACTCCGTATCAAAGGACCTAATCAATTGGGAAACCATTGAACCGGCCATTTACCCCTCCAAACCGTTTGACAAGTACGGGTGTTGGTCCGGTTCAGCCACCATTGTTCCGGGCAAAGGACCAGTGATCCTCTACACTGGAGTTGCCGATGAAAAACAAACGCAGGTCCAATGCTATGCAGTACCGGAGAACGTATCCGACCCGTTTCTCAGGAAATGGGTGAAGCCCGACTTCATCAACCCTCTGGTGGTTGCAGACATCGGCGTCAACGGCAGCGCTTTCCGTGACCCGACGACAGCGTGGTGGAGCAAGAGAGACGGTCACTGGAGGATCCTGGTCGGCGGGAGGAGGGGGCTAAGAGGAGTAGCCCATCTATATAGAAGCAGGGACTTCGTGAATTGGGTCAAAGCCAAACACCCGATCCATTCTTCAGTATCGACGGGTATGTGGGAATGCCCCGACTTCTACCCGGTTCCAGTGAGAGGCAAACAAGGGCTGGACACATCGGTGGTGGGGAAAAACGTAAAGCACGTGTTGAAGAATAGCCTCGACATGACGAGGTTTGAATACTACACAATCGGAAAGTACATCCGGGAGCAGGATAGGTATATCCCGGAGAACACTTCGGAGGATGGCTGGGGTGGCCTCCGGTATGATTACGGTAACTTCTATGCTTCCAAGTCATTCTTCGATCCTGTCAAGAAACGAAGGGTCCTGTGGGGTTGGGCAAACGAGTCTGATTCTAGGGTTGATGATGTCAGAAAAGGGTGGGCTGGAATTCAGGGAATCCCGAGAACAGTGTGGCTTGATTCGAACGGGAAACAATTGGTTCAATGGCCGGTGGCAGAATTGAACAGTCTTAGAGGTAAGCAAGTTCAGCTGAGCGACAAGAGGCTTCGAAAGGGAGAATATGAGGAAGTAAGAGGAATTACAGCTGCCCAGGCTGACGTGGAAGTGACGTTTTCGTTTTCAAGGTTGGACAAGGCAGAAGAGTTTGATCGGAAGTGGGTGAACGCACAGGATCTGTGTGCTGAAAAGGGGTCAAAGGTTGAAGGTGGGGTTGGACCATTTGGGCTCCTCACTTTGGCATCTAAGAACCTGGAAGAGTTCACTCCTGTGTTTTTCAGAATTTTCAGGTCTCCAAACAAGCACGTGGTTCTCTTATGTTCTGATGCATCCAGTTCATCTCTGAGGAGTCGTGTGTACAAGCCATCATTTGCTGGTTTTGTGGACGTGGATTTAGCGGATAAGAAGCTCTCTCTTAGGAGTCTGATTGATCACTCGGTGGTGGAAAGTTTTGGAGCAGGAGGGAGAACAAACATACTGTCAAGGGTTTATCCAGAAATGGCCGTAGCTGATGCGGCCCACTTGTTCGTCTTCAATAACGGCACTGAGCCCATCCATGTGGAGAATCTCAAGGCTTGGACTATGAAATCTGCTCTTCGGAACTAA 1728 0.4925 MSPPKCLIVSFVLCLLLLTINNNAVEAFHDTYPLLQSVSATRVNQLRRTGYHFQPPKHWINDPNGPMYYKGYYHLFYQYNPKGAVWGNIVWAHSVSKDLINWETIEPAIYPSKPFDKYGCWSGSATIVPGKGPVILYTGVADEKQTQVQCYAVPENVSDPFLRKWVKPDFINPLVVADIGVNGSAFRDPTTAWWSKRDGHWRILVGGRRGLRGVAHLYRSRDFVNWVKAKHPIHSSVSTGMWECPDFYPVPVRGKQGLDTSVVGKNVKHVLKNSLDMTRFEYYTIGKYIREQDRYIPENTSEDGWGGLRYDYGNFYASKSFFDPVKKRRVLWGWANESDSRVDDVRKGWAGIQGIPRTVWLDSNGKQLVQWPVAELNSLRGKQVQLSDKRLRKGEYEEVRGITAAQADVEVTFSFSRLDKAEEFDRKWVNAQDLCAEKGSKVEGGVGPFGLLTLASKNLEEFTPVFFRIFRSPNKHVVLLCSDASSSSLRSRVYKPSFAGFVDVDLADKKLSLRSLIDHSVVESFGAGGRTNILSRVYPEMAVADAAHLFVFNNGTEPIHVENLKAWTMKSALRN 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0916 575 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 56 384 - -
Lele06g0916 575 SUPERFAMILY Concanavalin A-like lectins/glucanases 372 572 IPR013320 -
Lele06g0916 575 SMART glyco_32 52 529 IPR001362 GO:0004553|GO:0005975
Lele06g0916 575 Pfam Glycosyl hydrolases family 32 C terminal 375 567 IPR013189 -
Lele06g0916 575 CDD GH32_Fruct1-like 58 361 - -
Lele06g0916 575 Pfam Glycosyl hydrolases family 32 N-terminal domain 52 372 IPR013148 -
Lele06g0916 575 Gene3D Glycosyl hydrolase domain; family 43 57 385 IPR023296 -
Lele06g0916 575 ProSitePatterns Glycosyl hydrolases family 32 active site. 52 65 IPR018053 GO:0004553|GO:0005975
Lele06g0916 575 Gene3D - 386 569 - -
Lele06g0916 575 SUPERFAMILY Arabinanase/levansucrase/invertase 43 373 IPR023296 -
Lele06g0916 575 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 17 572 - -
Lele06g0916 575 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 384 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0916 Lele-ChrLele06 5692738 5696562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0916 21 574 Glycoside Hydrolase AT2G36190 63.604 0.0 732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0916 06 5692738 5696562 Lele06g0916 06 5692738 5696562 ECH
Lele06g0916 06 5692738 5696562 Lele07g1092 07 6606498 6610348 hybridization
Lele06g0916 06 5692738 5696562 Lele08g0905 08 5726059 5735803 hybridization