Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1057 ATGTTTGTCGATCTCTGCTCCCAAAATATACAATCTGAAAGTGGTATGGGATCCAGTATTAGACCCCTCTGTTCGCCGACATTCATCCATCCATTCGTCCTAAACCTCTGCTTTGGCAGTAACATCTACATCAATGGCCCTATTTTCCTAGTTGTATCCACGGCATCAATTCGTCTGCTTGTCACATCTCTGGACCAGCATGCATTCCAAGGGAATGGTGATCGGTCATGCTCGCCAACTGTTTTGCGTCGCTACCTTTTCAAGCTCAGTGCCAAGCAGATCTCCCAGGTAAAGCTCTTGGGTCTTATCCCTCATGATTTGCTCGTTGAACATTTTGCTGGTGGAGCAGTTGAAGCCTTTCATGATATATACCCACTTCTTCAATCCGTTTCAGCTACCAAGGTGAATCAACTTCGCAAAACTGGCTATCACTTTCAACCTCCTAAGCACTGGATTAACGATCCAAACGGACCTATGTACTACAACGGGCACTACCACCTATTCTACCAGTACAACCCCAAAGGAGCAGTGTGGGGGAATATAGTGTGGGCCCACTCCATATCAAAGGACCTAATCAATTGGGAAACTATTGAACCGGCCATTTACCCCTCCAAACCCTTTGACAAGTACGGGTGTTGGTCCGGTTCAGCCACCATTGTTCCGGGCAAAGGACCAGTAATCCTCTACACTGGAGTCCCCGATGAAAAACAAACGCAGGTCCAATGCTATGCAGTACCGGAGAACGCATCCGACCCATATTTGAGGAAATGGGTGAAGCCCGACTCCATCAACCCGCTGGTGGTTGCAGACATCGGCGTCAACCGCAGCGCTTTCCGTGACCCAACGACTGCATGGTGGAGCAAGAGGGACCGTCACTGGAGGATCCTGGTCGGCGGGAGAAGGGGGCTAAGAGGAGTAGCCCATCTATATAGAAGCAGGGACTTCTTGAATTGGGTCAAAGCCAAACACCCGATCCATTCTTCAGCATCGACGGGTATGTGGGAATGCCCCGACTTCTACCCGGTTCCTGTGAGAGGCAAACAAGGGCTGGACACATCGGTGGTGGGGAAACACGTGAAGCATGTGTTGAAGAATAGCCTTGACATGACGAGGTTTGAGTACTACACAATCGGAAAGTACATGCCGGATCAGGATAGGTATATACCGGACAACACTTCGGAGGATGGTTGGGGTGGCCTCCGGTATGATTACGGTAACTTTTATGCTTCCAAGTCATTCTTCGATCCCATCAAGAAACGAAGGGTCCTGTGGGGCTGGGCAAACGAGTCTGATTCTAGGGTTGATGATGTCAGAAAAGGATGGGCCGGAATTCAGGGGATCCCGAGAACGGTGTGGCTCGATTCGAACGGGAAACAACTGGTTCAATGGCCGGTGGCAGAATTGAACAGTCTTAGAGGGAAACAAGTTCAGCTAAGCAACAAGAGGCTTGGAAAGGGAGAATACGAGGAAGTAAAAGGAATTACAGCTGCCCAGGCTGACGTGGAAGTTACGTTGTCGTTTTCAAGCTTGGACAAGGCAGAACAGTTTGATCGTAAGTGGGTGAACGCACAGGATCTGTGTGCTGAAAAAGGGTCCAAGGCTGAAGGTGGGGTTGGACCATTTGGGCTCCTGACTTTGGCTTCTAAGAACCTCGAAGAGTTCACTCCTGTGTTTTTCAGAATCTTCAAAGCTCCAAGCAAGCACGTGATTCTCTTGTGCTCTGATGCATCCAGTTCATCTCTGAGGAGTCGTGTGTACAAGCCATCGTTTGCTGGCTTTGTGCACATGGATTTAGCGGACAAGAAGCTTTCTCTTAGGAGTCTGATTGATCACTCGGTGGTGGAGAGTTTCGGAGCAGGAGGGAGAACAAACATACTGGCGAGGGTTTATCCAGAATTGGCCGTAGCTGGTGCAGCCCACTTGTTCGTGTTCAATAACGGTACCGAGCCCATCACTGTGGAGAATCTCAAGGCTTGGACAATGAAATCTGCTCTCAGAAACTAA 2004 0.4945 MFVDLCSQNIQSESGMGSSIRPLCSPTFIHPFVLNLCFGSNIYINGPIFLVVSTASIRLLVTSLDQHAFQGNGDRSCSPTVLRRYLFKLSAKQISQVKLLGLIPHDLLVEHFAGGAVEAFHDIYPLLQSVSATKVNQLRKTGYHFQPPKHWINDPNGPMYYNGHYHLFYQYNPKGAVWGNIVWAHSISKDLINWETIEPAIYPSKPFDKYGCWSGSATIVPGKGPVILYTGVPDEKQTQVQCYAVPENASDPYLRKWVKPDSINPLVVADIGVNRSAFRDPTTAWWSKRDRHWRILVGGRRGLRGVAHLYRSRDFLNWVKAKHPIHSSASTGMWECPDFYPVPVRGKQGLDTSVVGKHVKHVLKNSLDMTRFEYYTIGKYMPDQDRYIPDNTSEDGWGGLRYDYGNFYASKSFFDPIKKRRVLWGWANESDSRVDDVRKGWAGIQGIPRTVWLDSNGKQLVQWPVAELNSLRGKQVQLSNKRLGKGEYEEVKGITAAQADVEVTLSFSSLDKAEQFDRKWVNAQDLCAEKGSKAEGGVGPFGLLTLASKNLEEFTPVFFRIFKAPSKHVILLCSDASSSSLRSRVYKPSFAGFVHMDLADKKLSLRSLIDHSVVESFGAGGRTNILARVYPELAVAGAAHLFVFNNGTEPITVENLKAWTMKSALRN 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1057 667 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 476 661 - -
Lele05g1057 667 ProSitePatterns Glycosyl hydrolases family 32 active site. 144 157 IPR018053 GO:0004553|GO:0005975
Lele05g1057 667 Pfam Glycosyl hydrolases family 32 C terminal 467 659 IPR013189 -
Lele05g1057 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 464 664 IPR013320 -
Lele05g1057 667 Gene3D - 478 661 - -
Lele05g1057 667 Gene3D Glycosyl hydrolase domain; family 43 149 477 IPR023296 -
Lele05g1057 667 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 116 664 - -
Lele05g1057 667 SUPERFAMILY Arabinanase/levansucrase/invertase 135 465 IPR023296 -
Lele05g1057 667 CDD GH32_Fruct1-like 150 453 - -
Lele05g1057 667 SMART glyco_32 144 621 IPR001362 GO:0004553|GO:0005975
Lele05g1057 667 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 148 476 - -
Lele05g1057 667 Pfam Glycosyl hydrolases family 32 N-terminal domain 144 464 IPR013148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1057 Lele-ChrLele05 6575947 6585967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1057 116 666 Glycoside Hydrolase AT2G36190 62.877 0.0 721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1057 05 6575947 6585967 Lele05g1057 05 6575947 6585967 ECH
Lele05g1057 05 6575947 6585967 Lele07g1092 07 6606498 6610348 hybridization
Lele05g1057 05 6575947 6585967 Lele08g0905 08 5726059 5735803 hybridization