Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0896 ATGAACAAGGTCGAACTCGTTCGCTTCAATCACGAGACATTGAATTACAGCACTGACCCTAGTCTGATGTTGGACCATCCTTATGCTGCAACTAACATCATGTTCTTCCCCTCGGAGGCTGACACGAATCCCGACATCATCGCCACCTCCGGCGACTACCTAAGGCTCTGGGAAATACACGATGATCGGATTGAGCTCAAGTCCCTCCTAAGCGGCAACAAAGTCAGAGATAACTCGGCCATAAGCTCATTCTACTGGGCAGAGTTCGACACGCGTCGTGTCGCGGCATCGAGCGTGGACACGACGTGCACCATATGGGATATCGAGAAGGAAGCTTTGGATACGCAATTAGTGGCACATGACAAAGAAGTTTACGACATATCATGGGGTGGTTTTAACGGGTTCGCTTCACTTTCTGGGGATGGTTCCGTGAGAGTTTTTGACTTGAGGGACAAAGAAAGATCGACCATAATCTTTGAAAACCCAGTACAAGATTGTCCTCTGCTACGCCTCGAATGGAATAAAGGGGACCCGAGGTTTATAGCTACGGTCGGAATGGACAGTAATAAAGTGGTGATAATGGATATTAGGCAACCAACCACACCGTTGATGGAATTAAATAAGCATAAGGCAAGTGTTAATGTTATATCGGGGTCCCCACAAATGGGACGCCAGCTTTGCTATTGTGGTGATGATTCAAGGGCTTTGATTTGGGACGCGGTGGGAACTGGGTTTCCGCCGAGGAATAATAATAATGGTGATGATGTGAAGCCAGATTTGTGTTATGAATCAACGGCTGAGATCAATCAAGTTCGGTGGTCTCCTGTTCAGAGTGATTGGATTGCCGTTGCTTTCGTGAATATGTTACAGCTTTTGAAGGTGTGGAAATAG 891 0.4691 MNKVELVRFNHETLNYSTDPSLMLDHPYAATNIMFFPSEADTNPDIIATSGDYLRLWEIHDDRIELKSLLSGNKVRDNSAISSFYWAEFDTRRVAASSVDTTCTIWDIEKEALDTQLVAHDKEVYDISWGGFNGFASLSGDGSVRVFDLRDKERSTIIFENPVQDCPLLRLEWNKGDPRFIATVGMDSNKVVIMDIRQPTTPLMELNKHKASVNVISGSPQMGRQLCYCGDDSRALIWDAVGTGFPPRNNNNGDDVKPDLCYESTAEINQVRWSPVQSDWIAVAFVNMLQLLKVWK 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0896 296 PANTHER WD REPEAT CONTAINING PROTEIN 2 294 IPR045159 -
Lele08g0896 296 SMART WD40_4 199 239 IPR001680 GO:0005515
Lele08g0896 296 SMART WD40_4 255 296 IPR001680 GO:0005515
Lele08g0896 296 SMART WD40_4 154 195 IPR001680 GO:0005515
Lele08g0896 296 SMART WD40_4 63 107 IPR001680 GO:0005515
Lele08g0896 296 SMART WD40_4 110 148 IPR001680 GO:0005515
Lele08g0896 296 Gene3D - 5 296 IPR015943 GO:0005515
Lele08g0896 296 SUPERFAMILY WD40 repeat-like 24 287 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0896 Lele-ChrLele08 5669349 5670239 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0896 08 5669349 5670239 Lele08g0896 08 5669349 5670239 ECH
Lele05g1049 05 6522261 6523283 Lele08g0896 08 5669349 5670239 hybridization
Lele06g0907 06 5641891 5644069 Lele08g0896 08 5669349 5670239 hybridization