Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0852 ATGGATCCGGCGAAGACGCCGCTTGGCCAGATGTTACTGGATGAGATCACTCCAGTCGTGATGGTACTTTCTACTCCTTCTGTCGAAGAGGCTTGCCTCAAGAATGGCCTCAGCCTCCTTCAGATGCTGTCCCCATTCAGCTCTTTTGACAACATCGACGTGCCAGTAAGGACTGCCAGTGACCAGCCCTATAGGCTTCAGAAGTTCAAATTGCGATTATATTATGCTTCGGATGTCAGGATGCCAGATTTGGAGGTAGGTAAAGAGCATTTAAAGCAAGTTATCACAGAGGCAGGGGAGAAAGAGTTCAGTGAGCTGAGTTTGGATACACAAGAAATTAATCATGTACACGAGAGTTTTCAATCCGGAAATGCACCATCCTGGTTTCAGTTTTTTAACAAAGAACTTATCCGTGTGGTCTCCTTTTCAGACCATGAAGCTTTTGATCATCCTGTGGCATGTCTTTTGGCTGTTTCTTCTAAGGATGAACAACCAATTAACAGATTTATTGACCTATTTAACACCAACAAGCTGCCTTCCCTTCTTAATGATGGCGTGATGGATCCAAAGATTTTGAAGCATTATTTATTAGTGCATGATAATCAAGATGTCCCTTCTGACTGGGCAACTAAAATATTGACCGAAATGAGGAGCACATTTGGTACTGGTGACTGTTCGTTGCTATGTATCAATTCTTCAACTGATGCTCCAGTCAAACATGAAGAGAACCCGTGGGCTCCATATAAATCCGATGTCTCTCCTGGTCAAGATCTTGGTTTCTTTCTTAACACTGATGATATCAATATGATTAAAGACCTAATGCAAGATTTATCATCCAAGCACATCATTCCAAGCATGGAGCAAAAGATTCGTGTGCTCAACCAACAAGTTTCTGCAACTCGGAAAGGCTTTAGAAACCAAATGAAAAATTTATGGTGGAGAAAAGGGAAAGAGGATAACACAGATTCTGTCAATGGTCCTATGTATGCCTTTAGTTCCACCGAATCCCAAATTCGAGTTTTGGGTGATTATGCTTTCATGTTAAGGGATTATGAACTTGCCTTGTCAAATTATCGCATAATTTCCACGGATTACAAACTTGATAAAGCTTGGAAGCACTATGCTGGTGTGCAGGAAATGATGGGACTTACGTACTTCATGTTGGACCAATCAAGAAAGGAAGCTGAATATTGCATGGAAAATGCCTTTAACACTTATTTAGTATATTGTTATGTCCAGAAACTCAGTTCATCTGGGCAGCAAAATGCCACGCGATGTGGTCTCTGGTGGATAGAAATGTTGAATGCACGAGATCTATATAAGGAGGCAGCTCCAATTTATTTCCGCATTTGTGGTGAGGATATCCTACATTCTGCTGTGATGCTTGAACAAGCATCCTACTGCTACTTGCTGTCCAAGCCTTCCATGTTACGTAAATTTGGATTTCATCTTGTGCTTTCTGGGGATCATTATAACAAGTGTGATCAGATCAAACATGCAATCCGAACATACAGAAGTGCTCTCTTTGTTTTTAGGGAAACTACATGGAGTTATATCAAAGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGGATGGGCGATGTGGCCGTCAAGCATATGTTGGAAATTTTGGCTTGTGGCCACCAGTGCAAGACAACACAGGAGTTATTTTTGGGTGACTTTCTTCAAATAGTTCAGAAAACAGGACGAACTTTTGAAGTATCCAGACTTCAGTTGCCTGTAATCAACATTTCTTCACTCAAGGTTGTCTTTGAAGACCATCGAACTTTTGGATCACCTTCGGCTGCTAACACTAGAGAAAGCTTGTGGCGTTCCTTGGAGGAAGAAATAATACCATCGCTCTCTACTACAAAGAGCAATTGGTTGGAGTTGCAATCAAAGCTTATCTCAAAAAAGTACAGAGAATCAAATGTTTGTGTTGCAGGAGGTGTAGGCTGCTGGAAGGCTCACTGGGATAAACACAGTAGAAATAAGAAACCTTACCCTCCTAGTCCATCCAATTTGGAGGATATGCGAAGACTTGAGCAAGGGCATAAGAGATCATTCAGTTTATGCATTGTTTCACTAACCTATTACAGAAGCCGTGAAGGTGAATGTCGAATTCAAAAACCCTCTTCAAATACCAATTCCTGTGTCTGGAGTTACCCTTATGAAAATATTTCAAGGATGGAAAATGATAATGCGGGTAAACGTGAAGAGGTGACAGGCTGCAGGGACATGAGCTCTGAGAATTCTTTTCTGGTGTCGGAGGTTGACTTCTTATTAAGAGGTGGTGAAACAACCATGGTGCAACTATCAGTTACTCCAAGAGAAGAAGGTACTCTGGAAGTTCTTGGTGTTAGGTGGAAATTGTTGGGTTCTATAGTCGGCTTTCATGACTTTGACTTTAATCATGTAAAGAAGTACATTCCAAAGGGAAAGGGGAAAGGGAAGCGCTCAACGAATGAAAACTTAAAGTTTTTAGTGATTAAGTTAAGCCATCCTAGATTTCTGAATATTGGAAGTCCGGAAAGTATGAAGTCAGAGCTTCCTGTTTGCTTAATGAAGAAGGTGGATTCAGTACCAAGTGATGCAGATGCTAATCCATTTAACATGTCTGACACAGTCTTTATGTTTCCGGAGGGCACTTCTGTTCAGGGCACTTCTGTTCAGGGCGCTACACCATTCGCATGGCCTCTTTGGTTTAGGGCAGCTTTTCCTGGCGATATTTCTCTATATATAAGCATATATTATGAAATCGGAGATATATCAAGTGTCATCAAATACCGTATTCTTCGGTTACAATACAATCTACAGGTATTGCCATCATTGGACGTGTCTTTTCAAATTAGTCCTTCTCCATTGAGATTCCAAGAGTACCTTGTTCGAATGGATGTTGTTAACAAGGCAGCCTCAGAAGATTTCCAAGTTAATCAGCTGTCCTCTTTTGGGAGCAACTGGGAAATATCATTACTTCAGCATGCTGATACCATTTTCCCTTCAATATCATTGAAGGCCGGTCAAGCAATATCATGTTTCTTAACAATAAAGATTAGCGTTTGCCATCAGAATTGCAGGATCCTATCGACTGCTATGGACAATATATCTTTGGTTCCTAAGCCTGTCAAAAATGACATCAAATTGGTTCCTCAAGGTAGTGAGGATTCAGTTTATGATACGAGTAGTGAGCCTTTGGTCTATTTCCACCATTACGAAAGATTGCAGCAGGAATTACCAAATGAGGCACGGGGAGACCTGAACACTGTTGATTTTGTATTGATCTCTCGACTTTGGCAGAGTAACGGTAATGCTGGCACGGGCCCTATCTCATGGATGTTGGATGGCCCTCGAACCTTACATCATAATTTCTCTGCATCCTTCTGTGAATTAAATCTGAAGATGCATCTTCACAATTACTCTGATGCCACCGCTTTCGTGTGCATTACCACCTCGGATTCTGCTGTCGATGGTGGGCATCTGAACAGTGTAAACATGGCTCAGTCAGCATCTTCTTCTGACGATCAAGGAGGTTGGTGGCGTGTCACCCCGGTGAATGAAGTAAAAGTCACATCAAACATTAGTGGGACAGAACTGGAAAAGCCTCTATCATTAGGAAGTGTCTCCCCATACATTTGGTCTGGATCAAGCTCGACCAATATCCACCTAGAGTCCATGTCCTCAGCTGAAGTTCCTCTTCAGATCTACGCGGTTCGCAATCGTGGCTTTTGGTTATTGGAAGGAAAGAAACGGGATTTGGATTTCATGCATTCATAA 3786 0.4173 MDPAKTPLGQMLLDEITPVVMVLSTPSVEEACLKNGLSLLQMLSPFSSFDNIDVPVRTASDQPYRLQKFKLRLYYASDVRMPDLEVGKEHLKQVITEAGEKEFSELSLDTQEINHVHESFQSGNAPSWFQFFNKELIRVVSFSDHEAFDHPVACLLAVSSKDEQPINRFIDLFNTNKLPSLLNDGVMDPKILKHYLLVHDNQDVPSDWATKILTEMRSTFGTGDCSLLCINSSTDAPVKHEENPWAPYKSDVSPGQDLGFFLNTDDINMIKDLMQDLSSKHIIPSMEQKIRVLNQQVSATRKGFRNQMKNLWWRKGKEDNTDSVNGPMYAFSSTESQIRVLGDYAFMLRDYELALSNYRIISTDYKLDKAWKHYAGVQEMMGLTYFMLDQSRKEAEYCMENAFNTYLVYCYVQKLSSSGQQNATRCGLWWIEMLNARDLYKEAAPIYFRICGEDILHSAVMLEQASYCYLLSKPSMLRKFGFHLVLSGDHYNKCDQIKHAIRTYRSALFVFRETTWSYIKDHVHFHIGQWYASLGMGDVAVKHMLEILACGHQCKTTQELFLGDFLQIVQKTGRTFEVSRLQLPVINISSLKVVFEDHRTFGSPSAANTRESLWRSLEEEIIPSLSTTKSNWLELQSKLISKKYRESNVCVAGGVGCWKAHWDKHSRNKKPYPPSPSNLEDMRRLEQGHKRSFSLCIVSLTYYRSREGECRIQKPSSNTNSCVWSYPYENISRMENDNAGKREEVTGCRDMSSENSFLVSEVDFLLRGGETTMVQLSVTPREEGTLEVLGVRWKLLGSIVGFHDFDFNHVKKYIPKGKGKGKRSTNENLKFLVIKLSHPRFLNIGSPESMKSELPVCLMKKVDSVPSDADANPFNMSDTVFMFPEGTSVQGTSVQGATPFAWPLWFRAAFPGDISLYISIYYEIGDISSVIKYRILRLQYNLQVLPSLDVSFQISPSPLRFQEYLVRMDVVNKAASEDFQVNQLSSFGSNWEISLLQHADTIFPSISLKAGQAISCFLTIKISVCHQNCRILSTAMDNISLVPKPVKNDIKLVPQGSEDSVYDTSSEPLVYFHHYERLQQELPNEARGDLNTVDFVLISRLWQSNGNAGTGPISWMLDGPRTLHHNFSASFCELNLKMHLHNYSDATAFVCITTSDSAVDGGHLNSVNMAQSASSSDDQGGWWRVTPVNEVKVTSNISGTELEKPLSLGSVSPYIWSGSSSTNIHLESMSSAEVPLQIYAVRNRGFWLLEGKKRDLDFMHS 1261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0852 1261 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 187 524 IPR024420 -
Lele08g0852 1261 PANTHER TRANSPORT PROTEIN TRAPP 3 834 IPR024420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0852 Lele-ChrLele08 5357556 5369998 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0852 08 5357556 5369998 Lele08g0852 08 5357556 5369998 ECH
Lele05g1004 05 6195583 6204081 Lele08g0852 08 5357556 5369998 hybridization
Lele06g0862 06 5350575 5362918 Lele08g0852 08 5357556 5369998 hybridization