Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0862 ATGGATCCGGCGAAGACGCCGCTTGGCCAGATGTTACTGGACGAGATCACTCCAGTCGTGATGGTACTTTCTACTCCTTCTGTCGAAGAGGCTTGCCTCAAGAATGGCCTCAGCTTCCTTCAGATGCTGTCCCCATTCAGCTCTTTTGACAACATCGACGGTAATCCTTCATTTTCTAGCAATGCCCGCATTTTCGAGCCCTTTATAAAGGGTGGTGACAAGTTTTATCGGCCTGATGCCAGATTTGGAGGTAAAGAGCATTTAAAGCAAGTTATCACAAAGGCAGGGGAGAAAGAGTTCAGTGAGCTGAGTTTGGATACACCAGAAATTAATCATGTACACGAGAGTTTTCAATCCGGAAATGCCCCATCCTGGTTTCAGTTTTTTAACAAAGAACTCATCCGTGCGGTCTCCTTTTCAGACCATGAAGCTTTTGATCATCCTGTGGCATGTCTTTTGGCTGTTTCTTCTAAGGATGAACAACCAATTAACAGATTTATTGACCTATTTAACACCAACAAGCTGCCTTCCCTTCTTAATGATGGCATGATGGATCCAAAGATTTTGAAGCATTATTTATTAGTGCATGATAATCAAGATGGCCCTTCTGACAGGAAGTGGATCATTCTGTGAGCAACTAAAATGTTGCCCGAAATGAGGAGCACATTTGGTACTGGTGACTGTTCGTTGCTATGTATCAATTCTTCAACTGATGCTCCAGTCAAACATGAAGAGAACCCGTGGGCTCCATATAAATCCGATGTCTCTCCTGGTCAAGATCTTGGTTTCTTTCTTAACACTGATGATATCAATATGGTTTCTGCAATACGGAAAGGCTTTAGAAACCAAATGAAAAATTTATGGTGGAGAAAAGGGAAAGAGGATAACACAGATTCTGTCAATGGTCCTATGTATGCCTTTAGTTCCACCGAATCCCAAATTCGAGTTTTGGGTGATTATGCTTTCATGTTAAGGGATTATGAACTTGCCTTGTCAAACTATCGCTTAATTTCCAAGGATTACAAACTTGATAAAGCTTGGAAGTACTATGCTGGTGTGCAGGAAATGATGGGACTTACGTACTTCATGTTGGACCAATCAAGAAAGGAAGCTGAATATTGCATGGAAATTGCCTTTAACACTTATTTAGATATCCTACATTCTGCTGTGATGCTTGAACAAGCATCCTACTGCTACTTGCTGTCCAAAACTTCCATGTTACGTAAATTTGGATTTCATCTAGTGCTTTCTGGGGATCGTTATAACAAGTGTGATCAGATCAAACATGCAATCCGAACATACAGAAGTGCTCTCTTTGTTTTTAGGGAAACTACATGGAGTTATATCAAAGATCATGTTCATTTCCATATAGGACAGTGGTTTGCTTCTCTTGGGATGGGCGATGTGGCCGTCAAGCATATGTTGGAAATTTTGGCTTGTGGTCACCAGTGCAAGACAACGCAGGAGTTATTTTTGGGTGACTTTCTTCAAATAGTTCAGAAAACAGGACGAACTTTTGAAGTATCCAGACTTCGGTTGCCTGTAATCAACATTTCTTCACTCAAGGTTGTCTTTGAAGACCACCGAACTTTTGGATCACCTTCGGCTGCTAACACTAGAGAAAGCTTGTGGCGTTCCTTGGAGGAAGAAATAATACCATCGCTTTCTACTACGAAGAGCAATTGGTTGGAGTTGCAATCAAAGCTTATCACAAAAAAGTACAGAGAATCAAATGTTTGTGTTGCAGGAGAAGCCGTGAAGGTGAATGTTGAATTCAAAAACCCTCTTCAAATACCAATTCCTGTGTCTGGAGTTACCCTTGTCTGCAAGCATTTTCCTGATGAAAATATTTCAAGGATGGAAAATGATAATGCGGGTAAACGTGAAGAGGTGACAGCCTGCAGGGACATGAGCTCTGAGAATTCTTTTCTGGTGTCGGAGGTTGACTTCTTATTAAGAGGTGGTGAAACAACCATGGTGCAACTATCAGTTACTCCAAGAGAAGAAGGTACTCTGGAAGTTCTTGGTGTTAGGTGGAAATTGTTGGGTTCTATAGTCGGCTTTCATGACTTTGACTTTAATCATGTAAAGAAGAACATTTCAAAGGGAAAGAGGAAAGGGAAGCACTCAACGAATGAAAACTTGAAGTTTTTAGTGATTAAGAGCATACCCAAGCTTCAAGGGTCCATTCAACCTTTCCCTGACAAGGCTTATGTGGGAGATTTACGGCACCTTGTTTTGGAGTTGAGAAACCCATCAGAATTTCCTGTTAAGAATCTGAAAGTGAAGATAAGCCATCCTAGATTTCTGAATATTGGAAATCCGGAAAGTATGAAGTCAAAGCTTCCTGCTTGCTTAATGAAGAAGGTAGATTCAGTACCAAGTGAGGCAAATGCTAATCCATTTAACATGTCTGACACAGTCTTTATGTTTCCGGAGGGCACGTCTGTTCAGGGTGCTACACCATTCGCATGGCCTCTTTGGTTTAGGGCAGCTTTTCCTGGAGATATTTCTCTATATATAAGCATATATTATGAAATTGGAGATATATCAAGTGTCATCAAATACCGTATTCTTCGGTTACAATACAATCTACAGGTATTGCCATCATTGGACGTGTCTTTTCAAATTAGTCCTTCTCCATTGAGATTCCAAGAGTACCTTGTTCGAATGGATATTGTTAACAAGGCAGCCTCAGAAGATTTCCAAGTTAATCAGCTGTCCTCTTTTGGGAGCAACTGGGAAATATCGTTACTTCAGCCTGCTGATACCATTTTCCCTTCACAATCATTGAAGGCCGGTCAAGCAATATCATGTTTCTTAACAATAAAGATTAGCGTTTGCCATCAGAATTGCAGGATCCTATCGACTGCTAAGGACAATATATCTTTGGTTCCTAAGCCTGTCAAAAATGATATCAAATTGGTTCCTCAAGGTAGTGAGGATTCAGTTTATGATACGAGTAGTGAGCCTTTGGTCAATTTCCACCATTACGAAAGATTGAAGCAGGAATTACCGCATGAGGCACGGGGAGACCTGAACACTGTTGATTTTGTATTGATCTCTGGACGGCGGCAGAGTAACAGTAATGCTGGGTTTGTTGACCATCCTCTTGTTATGTCTCATTATGCATGCCATTGCAGGCAAGTTCTATTCCAAACCTAA 3165 0.4104 MDPAKTPLGQMLLDEITPVVMVLSTPSVEEACLKNGLSFLQMLSPFSSFDNIDGNPSFSSNARIFEPFIKGGDKFYRPDARFGGKEHLKQVITKAGEKEFSELSLDTPEINHVHESFQSGNAPSWFQFFNKELIRAVSFSDHEAFDHPVACLLAVSSKDEQPINRFIDLFNTNKLPSLLNDGMMDPKILKHYLLVHDNQDGPSDRKWIILXATKMLPEMRSTFGTGDCSLLCINSSTDAPVKHEENPWAPYKSDVSPGQDLGFFLNTDDINMVSAIRKGFRNQMKNLWWRKGKEDNTDSVNGPMYAFSSTESQIRVLGDYAFMLRDYELALSNYRLISKDYKLDKAWKYYAGVQEMMGLTYFMLDQSRKEAEYCMEIAFNTYLDILHSAVMLEQASYCYLLSKTSMLRKFGFHLVLSGDRYNKCDQIKHAIRTYRSALFVFRETTWSYIKDHVHFHIGQWFASLGMGDVAVKHMLEILACGHQCKTTQELFLGDFLQIVQKTGRTFEVSRLRLPVINISSLKVVFEDHRTFGSPSAANTRESLWRSLEEEIIPSLSTTKSNWLELQSKLITKKYRESNVCVAGEAVKVNVEFKNPLQIPIPVSGVTLVCKHFPDENISRMENDNAGKREEVTACRDMSSENSFLVSEVDFLLRGGETTMVQLSVTPREEGTLEVLGVRWKLLGSIVGFHDFDFNHVKKNISKGKRKGKHSTNENLKFLVIKSIPKLQGSIQPFPDKAYVGDLRHLVLELRNPSEFPVKNLKVKISHPRFLNIGNPESMKSKLPACLMKKVDSVPSEANANPFNMSDTVFMFPEGTSVQGATPFAWPLWFRAAFPGDISLYISIYYEIGDISSVIKYRILRLQYNLQVLPSLDVSFQISPSPLRFQEYLVRMDIVNKAASEDFQVNQLSSFGSNWEISLLQPADTIFPSQSLKAGQAISCFLTIKISVCHQNCRILSTAKDNISLVPKPVKNDIKLVPQGSEDSVYDTSSEPLVNFHHYERLKQELPHEARGDLNTVDFVLISGRRQSNSNAGFVDHPLVMSHYACHCRQVLFQT 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0862 1054 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 274 384 IPR024420 -
Lele06g0862 1054 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 386 454 IPR024420 -
Lele06g0862 1054 PANTHER TRANSPORT PROTEIN TRAPP 385 1047 IPR024420 -
Lele06g0862 1054 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 573 762 IPR013935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0862 Lele-ChrLele06 5350575 5362918 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0862 06 5350575 5362918 Lele06g0862 06 5350575 5362918 ECH
Lele06g0862 06 5350575 5362918 Lele07g1040 07 6255691 6273401 hybridization
Lele06g0862 06 5350575 5362918 Lele08g0852 08 5357556 5369998 hybridization