Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0813 ATGATTGAGCGTTCGGCGGCAGTGTGGCAAGGAGCAGCTCTCGGTGGATTATTCTTCTGGATTTTGTCGTCTTCATACCTCAATGTGACTCGCAGGCTTAGATCTTTCCTCCAGCCCTGGGTAATTCACCATGTCGAGTCTGGAACCTCTATTGTCCTTCAGATCCAGAGTTACAGGCTTGGAATTCTGGACGCTTTTTTCTCTGGATTGTGTTGCATTGTTTCCGTTCCCTTTTACACAGCTTTTCTTCCTCTGGTATTCTGGAGTGGATATTGCAAATTGGCAAGGCAGCTAACGTTGCTGATCGCGTTCTCTGATTATGTTGGTAATTGTGTAAAGGATGTGGTATCAGCTCCAAGACCTGCTTCTCCGCCTGTTCGGAGATTAACAGCCACAAAAGATGAAGAAGACAATGCGTTAGAATATGGGCTGCCTTCATCTCACACTCTTAATACAGTCTGCTTCGCTGGCTACATTGTGCGCTATATCCTGACTGATACTCAAATTCAAGGTACTTATGCTAGTGTACTTGGAGTGGTCTTTGCTAGCTTACTCGTGGCTTTCATTGGTTTGGGAAGAATTTATCTTGGCATGCACAGTTTGGTCGATGTCATTGGTGGTCTTTTTATTGGACTTGGAACCCTTGCATTTTGGCTTCACATTGATGAATACCTAGATAGTTTTTTGACCTCCGGACAAAATGTCACATCATTTTGGGTTGCCTTGAGCATACTCTTGCTCTTTGCTTACCCAACTCCCGAACTTCCAACTCCAAGCTTTGAGTTTCACACTGCATTCAATGGTGTTGCACTGGGAATTGTCGCAGGAGTACAGCAGACATACCATCAATTTCACCATGACTCTGTACCACGTGTGTTTTCTCCAGAACTCGCAATGACAGTACCTGGATTTGTAGGAAGAATGCTTGTGGGAATACCTACAATCCTGGTCGTGAAATTCTGTAGCAAGGCTCTCGCAAAATGGACTCTTCCTGTGGTATCAAACACCTTGGGCATCCCAATAAAATCAACAAGTTATATCCCAACATTGAAAGGATCTTTCCAGGGAGATAAGTCTGATAAACTCAAACAGGCTTATTTGCAAAAGCTGCTTTCCCAGTATCAGGTATTTGATATTGATACTGGAATTAGATTTCTTCAGTATACGGGTCTTGCATGGGCCGTCGCTGACCTTGTGCCGTCGCTTTTTTCATATCTGAGCTTGTGA 1227 0.4409 MIERSAAVWQGAALGGLFFWILSSSYLNVTRRLRSFLQPWVIHHVESGTSIVLQIQSYRLGILDAFFSGLCCIVSVPFYTAFLPLVFWSGYCKLARQLTLLIAFSDYVGNCVKDVVSAPRPASPPVRRLTATKDEEDNALEYGLPSSHTLNTVCFAGYIVRYILTDTQIQGTYASVLGVVFASLLVAFIGLGRIYLGMHSLVDVIGGLFIGLGTLAFWLHIDEYLDSFLTSGQNVTSFWVALSILLLFAYPTPELPTPSFEFHTAFNGVALGIVAGVQQTYHQFHHDSVPRVFSPELAMTVPGFVGRMLVGIPTILVVKFCSKALAKWTLPVVSNTLGIPIKSTSYIPTLKGSFQGDKSDKLKQAYLQKLLSQYQVFDIDTGIRFLQYTGLAWAVADLVPSLFSYLSL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0813 408 CDD PAP2_SPPase1 62 219 - -
Lele08g0813 408 Pfam PAP2 superfamily 98 222 IPR000326 -
Lele08g0813 408 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 20 340 - -
Lele08g0813 408 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 32 227 IPR036938 -
Lele08g0813 408 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 48 238 - -
Lele08g0813 408 SMART acid_phosph_2 95 219 IPR000326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0813 Lele-ChrLele08 5112398 5115626 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0813 08 5112398 5115626 Lele14g1500 14 23196305 23198856 CCT
Lele08g0813 08 5112398 5115626 Lele15g0845 15 4908196 4912410 CCT
Lele08g0813 08 5112398 5115626 Lele16g0865 16 4876011 4878549 CCT
Lele08g0813 08 5112398 5115626 Lele08g0813 08 5112398 5115626 ECH
Lele05g0959 05 5936873 5939937 Lele08g0813 08 5112398 5115626 hybridization
Lele06g0825 06 5100359 5107310 Lele08g0813 08 5112398 5115626 hybridization