Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0959 ATGATGGAGCGTACGGCGGTAGTGTGGCAAGGAGCAGCGCTCGGTGGATTATTCTTCTGGATTGTGTCATCTTCATACCTCAATGTGACTCGCAGGCTTAGATCTTTCCTTCAGCCCTGGGTAATTCACCATGTCGAGTCTGGAACTTCTATTGTCCTTCAGATCCAGAGTTACAGGCTTGGAATTCTGGACGCTTTTTTCTCTGGATTGTGTTGCATTGTTTCCGTTCCCTTTTACACAGCTTTTCTTCCTCTGGTATTCTGGAGTGGATATTGCAAATTGGCAAGGCAGCTAACGTTGCTGATCGCGTTCTCTGATTATGTTGGTAATTGTGTAAAGGATGTGGTATCAGCTCCAAGACCTGCTTCTCCGCCTGTTCGGAGACTAACAGCCACAAAAGATGAAGAAGACAATGCATTAGAATATGGGCTGCCTTCATCTCATACTCTTAATACCGTCTGCTTATCTGGCTACATTGTGCACTATATCCTGACTGATACTCAAATTCAAGGTACTTATGCTAGTATACTTGGAGTTGTTCTTGCTAGCTTACTCGTAGCTTTCATTGGTTTGGGAAGAATTTATCTTGGCATGCACAGTTTGGTCGATGTCATTGGCGGTGTTTTCATTGGACTCGGAACCCTTGCATTTTGGCTTCACATTGATGAATACCTAGACAGTTTTTTAACCTCCGGACAAAATGTCACATCATTTTGGGTGGCCTTGAGCATACTCTTGCTCTTTGCTTACCCAACTCCCGAACTTCCAACTCCAAGCTTTGAGTTTCACTCTGCATTCAACGGTGTTGCGTTGGGAATTGTCGCAGGAGTACAGCAGACATACCATCAATTTCACCATGACTCTGTACCACGTGTGTTCTCTTCAGAACTCGCAATCACAGTACCTGAATTTGTAGGAAGAATGCTTGTGGGAATACCTACAATCCTGATCGTGAAATTCTGTAGCAAGGCTCTTGCAAAATGGACTCTTCCTGTGGTATCAAACACCTTGGGCATCCCAATAAAATCAACAAGTTATATCCCAACACTGAAAGAATCTTCCCAGGGAAAGAAGTCTGATAAACTCAAACAAGCTTATTTGCAAAAGCTGCTTTCCCAGTATCAGGTATTTGATATTGATACCGGAATTAGATTTCTTCAGTATACGGGTCTTGCATGGTCCGTCGTTGACCTTGTGCCGTCGCTTTTTTCATATCTGAGCTTGTGA 1227 0.436 MMERTAVVWQGAALGGLFFWIVSSSYLNVTRRLRSFLQPWVIHHVESGTSIVLQIQSYRLGILDAFFSGLCCIVSVPFYTAFLPLVFWSGYCKLARQLTLLIAFSDYVGNCVKDVVSAPRPASPPVRRLTATKDEEDNALEYGLPSSHTLNTVCLSGYIVHYILTDTQIQGTYASILGVVLASLLVAFIGLGRIYLGMHSLVDVIGGVFIGLGTLAFWLHIDEYLDSFLTSGQNVTSFWVALSILLLFAYPTPELPTPSFEFHSAFNGVALGIVAGVQQTYHQFHHDSVPRVFSSELAITVPEFVGRMLVGIPTILIVKFCSKALAKWTLPVVSNTLGIPIKSTSYIPTLKESSQGKKSDKLKQAYLQKLLSQYQVFDIDTGIRFLQYTGLAWSVVDLVPSLFSYLSL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0959 408 CDD PAP2_SPPase1 62 219 - -
Lele05g0959 408 Pfam PAP2 superfamily 98 222 IPR000326 -
Lele05g0959 408 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 47 238 - -
Lele05g0959 408 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 20 340 - -
Lele05g0959 408 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 35 227 IPR036938 -
Lele05g0959 408 SMART acid_phosph_2 95 219 IPR000326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0959 Lele-ChrLele05 5936873 5939937 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0959 05 5936873 5939937 Lele05g0959 05 5936873 5939937 ECH
Lele05g0959 05 5936873 5939937 Lele07g0999 07 6015241 6018556 hybridization
Lele05g0959 05 5936873 5939937 Lele08g0813 08 5112398 5115626 hybridization