Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0825 ATGAGCTGTTTTCTACGCGATTCATTATTGAAGAGGCGTAGAAAGAAAGCTCTCCAGCCCTGTGCAATTCACCATGTCGAGTCTGGAACCTCTATTGTCCTTCAGATCCAGAGTTACAGGCTTGGAATTCTGGACGCTTTTTTCTCTGGATTGTGTTGCATTGTTTCCGTTCCCTTTTACACAGCTTTTCTTCCTCTGGTATTTTGGAGTGGATATTGCAAATTGGCAAGGCAGCTAACGTTGCTGATCGCGTTCTCTGATTATGTTGGTAATTGTGTAAAGGATGTGGTATCAGCTCCAAGACCTGCTTCTCCGCCTGTTCGGAGATTAACAGCCACAAAAGATGAAGAAGACAATGCGTTAGAATATGGGCTGCCTTCATCTCACACTCTTAATACAGCCTGCTTCGCTGGCTACATTGTGCGTTATATCCTGACTGATACTCAAATTCAAGGAAGAATTTATCTTGGCATGCACAGTTTGGTCGATGTCATTGGTGGTCTTTTTATTGGACTCGAAACCCTTGCATTTTGGCTTCACATTGATGAATACCTAGACAGTTTTTTGACCTCCGGACAAAATGTCACATCATTTTGGGTTGCCTTGAGCATACTCTGGCTCTTTGCTTACCCAACTCCCGAACTTACAACTCCAAGCTTTGAGTTTCACACTGCATTCAACAGTGTTGCACTGGGAATTATCGCAGGAGTACAGCAGACATACCATCAATTTCACTATGACTCTGTACTACGTGTGTTTTCTCCGGAACTCGCAATGACAGTACCTGGATTTGTAGGAAGAATGCTTGTGGGAATACCTACAATCCTGATCGTGAAATTCTGTAGCAAGGCTCGCGCAAAATGGACTCTTCCTGTGGTATTTGATATTGATACTGGAATTAGATTTCTTCAGCATACGGGCCTTGCATGGTCTGTAGCTGACCTTGTGCCGTCGCTTTTTTCATATCTGAGCTTGTTAACAAGAAATCTTTCAGGCAAGGATGCGCAACTACCAGATACCAAAGCAGTAGACTTAACCATGATATCAGCATGA 1053 0.434 MSCFLRDSLLKRRRKKALQPCAIHHVESGTSIVLQIQSYRLGILDAFFSGLCCIVSVPFYTAFLPLVFWSGYCKLARQLTLLIAFSDYVGNCVKDVVSAPRPASPPVRRLTATKDEEDNALEYGLPSSHTLNTACFAGYIVRYILTDTQIQGRIYLGMHSLVDVIGGLFIGLETLAFWLHIDEYLDSFLTSGQNVTSFWVALSILWLFAYPTPELTTPSFEFHTAFNSVALGIIAGVQQTYHQFHYDSVLRVFSPELAMTVPGFVGRMLVGIPTILIVKFCSKARAKWTLPVVFDIDTGIRFLQHTGLAWSVADLVPSLFSYLSLLTRNLSGKDAQLPDTKAVDLTMISA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0825 350 Pfam PAP2 superfamily 79 181 IPR000326 -
Lele06g0825 350 SMART acid_phosph_2 76 179 IPR000326 -
Lele06g0825 350 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 22 303 - -
Lele06g0825 350 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 108 198 - -
Lele06g0825 350 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 31 187 IPR036938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0825 Lele-ChrLele06 5100359 5107310 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0825 06 5100359 5107310 Lele14g1500 14 23196305 23198856 CCT
Lele06g0825 06 5100359 5107310 Lele15g0845 15 4908196 4912410 CCT
Lele06g0825 06 5100359 5107310 Lele16g0865 16 4876011 4878549 CCT
Lele06g0825 06 5100359 5107310 Lele06g0825 06 5100359 5107310 ECH
Lele06g0825 06 5100359 5107310 Lele07g0999 07 6015241 6018556 hybridization
Lele06g0825 06 5100359 5107310 Lele08g0813 08 5112398 5115626 hybridization