Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0803 ATGTCTGGGAAAGCATCAAGTTCAAAGCCTTACATAGATTTGAGTGGATCTGGGGGTCTTTCACATGCTTATATTCAGTATCCGCCATTACAGTGCAACAATCCTGGATCAAAGGGTTTGTTTTATGATGACGGAAATAAACTTCTACTTTCCCCAACATCTGATCAGGTCTTCTCTTGGAAAGTTGTTCCCTTTGATCCTCATGTTGGTCCCACCATTGATTCAATAAGTGAAGGCCCCATCATATCTATTCGGTATTCCTTAGATGCGAAGGTCATAGCAATCCTAAGGTCAGATCATGCGATACAATTTTGGAATAGAGAGACTGGGGAAGCATTTACTCATACTTGCAGGCCAGAATCTGAAAGCATACTTGGATTTTTTTGGACAGATAGTCATATCTGTGATATTGTTCTTGTAAAGACTAGTGGACTAGACATGTATGCATATAATTCTGAGTCAAAGTCACTGCAATTAGTGGAGACAAAGAAATTGAATGTTAGTTGGTATGCTTACACACATGAAAGTCGTTTGGTTCTTCTCGCGTCCGGAATGCAGTGCAAGACATTTCATGGATTTCAGATTTCATCTGCAGATATTGTCCGCTTGCCGAGGTTTGAGATGGCTATGGCCAAATCTGAAGCAAATAGTAAGCCTGTTTTAGCAGCCGAAGACATCTATATTGTTACTGTTTATGGTAGGATATACTGCCTGCAATTTGATAGAGTTGCTATGCTCCTCCATTCATATAGGCTGTACCGTGATGCTGTGATACAGCAGGGTTCTTTGCCAATTTATTCGAGCAGGATCGCTGTGAGTGCAGTGGACAATGTACTTCTTATTCATCAAGTTGATGCAAAGGTTGTTATACTATATGATATATTTGCAGATTCTCGCGCTCCTATATCTGCACCACTTCCTCTATTGTTAAGGGGCCTCCCAAGGTCCAATTCTTTTTCATCTCGATCAACTGGTAAAGAAAGTGAGGGTTCAGATGCTAATCTTGTGAGTAATCATGGGGCAGTCACCTATGCCAATACGTGGTCTTTCCTAGTTCCTGACCTGATATGTGATGTGGCAAATAAGTTATTGTGGAAGATCCAGTTAGATTTAGAGGCAATTTCTGCCAGTAGCTCAGAGGTTCCATCAGTATTAGAGTTCTTGCAGAGGCGAAAGTTAGAAGCTAACAAGGCCAAACAATTGTGCTTGGGTATAATACGCACCCTTATTCTAGAGCGTAGGCCTGTATCTATGGTTGCCAAGGCTATACATGTATTAATCACTGCTTACTCCCATTCAATTAAAACCATTCCCCATCTAAGGGGAACTAAATCAGATAAAACATCAGCTTCTGGTGCACAACATGGTGTTAGCCCTTTGTCTGGTGCTGATGTGTCTGTTTTGGGAGCAGATGTACTTGGAAAATCTGTTATGCATGAGTCTGCTGCTAGAGTAGACAGTAGATCTCTTAATAAATCTTCAACTGTTTTGAGTTTGGATTCTGAGGGTGAGGCCAGATCTGCTAATCAAAGGCGCTATACACCTGAGACCCAGGCTCACAGTGCTCATGCTACACGATCTTCTTTGCAGTCTGGGCAAGAAGAGCCCCAACTTACTTCTCCAGCGATTTCACCTGATGAGATGTACAGCTTTGTCTTCGCTCCAGTTGATGAAGAAATGGTTGGAGATCCTTCTTACTTGGTCACTGTCATTGTTGAGTTCCTTCACAGTGCTAATGCAGAAAAGGTTCGAGTCCTCGCAAATCTGTATGTTTTAACAATTCAACTGCTGGCCCGTAATGAGCGATATGCAGAACTTGGGTTGTTTGTCATAGACAAGATTCTGGAGCCCTCTAAGGAAGTTGCATTACAACTCCTAGAGTCTGGTCGTCAGAATTCCCAAACTAGGAAGCTAGGGCTGGATATGCTGAGACAGCTTGGTTTACATCAGGATTATGTATTGTTGCTGGTGCAAGATGGATACTACCTGGAAGCCTTAAGATATGCTCGGAAGTACAAGGTGGATACGATCCGGCCATCGTTGTTCCTAGAAGCAGCATTTGTTTCCAAGGACCCCCAACATTTAGCTGCAGTTCTCAGATTCCTCTCGGATTTCCTTCCTGGGTTCAAACACACTTCAGAGCATAATAGATACTACCGCATTCTTAATGACGTAAGCACTGTTTCTGCTTGA 2193 0.425 MSGKASSSKPYIDLSGSGGLSHAYIQYPPLQCNNPGSKGLFYDDGNKLLLSPTSDQVFSWKVVPFDPHVGPTIDSISEGPIISIRYSLDAKVIAILRSDHAIQFWNRETGEAFTHTCRPESESILGFFWTDSHICDIVLVKTSGLDMYAYNSESKSLQLVETKKLNVSWYAYTHESRLVLLASGMQCKTFHGFQISSADIVRLPRFEMAMAKSEANSKPVLAAEDIYIVTVYGRIYCLQFDRVAMLLHSYRLYRDAVIQQGSLPIYSSRIAVSAVDNVLLIHQVDAKVVILYDIFADSRAPISAPLPLLLRGLPRSNSFSSRSTGKESEGSDANLVSNHGAVTYANTWSFLVPDLICDVANKLLWKIQLDLEAISASSSEVPSVLEFLQRRKLEANKAKQLCLGIIRTLILERRPVSMVAKAIHVLITAYSHSIKTIPHLRGTKSDKTSASGAQHGVSPLSGADVSVLGADVLGKSVMHESAARVDSRSLNKSSTVLSLDSEGEARSANQRRYTPETQAHSAHATRSSLQSGQEEPQLTSPAISPDEMYSFVFAPVDEEMVGDPSYLVTVIVEFLHSANAEKVRVLANLYVLTIQLLARNERYAELGLFVIDKILEPSKEVALQLLESGRQNSQTRKLGLDMLRQLGLHQDYVLLLVQDGYYLEALRYARKYKVDTIRPSLFLEAAFVSKDPQHLAAVLRFLSDFLPGFKHTSEHNRYYRILNDVSTVSA 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0803 730 Pfam Colon cancer-associated protein Mic1-like 564 703 IPR009755 -
Lele08g0803 730 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 19 720 IPR040371 GO:0010506|GO:0035658
Lele08g0803 730 SUPERFAMILY WD40 repeat-like 42 242 IPR036322 GO:0005515
Lele08g0803 730 MobiDBLite consensus disorder prediction 496 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0803 Lele-ChrLele08 5034377 5040473 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0803 08 5034377 5040473 Lele08g0803 08 5034377 5040473 ECH
Lele05g0950 05 5863865 5870233 Lele08g0803 08 5034377 5040473 hybridization
Lele06g0815 06 5004447 5010509 Lele08g0803 08 5034377 5040473 hybridization