Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0950 ATGTCTGGGAAAGCATCAAGTTCAAAGCCTTACATAGATTTGAGTGGATCTGGTGGTCTTTCACATGCTTATATTCAGTATCCACCATTACAGTGCAACAATCCTGGATCTAAGGGTTTGTTTTATGATGACGGAAATAAACTTCTACTTTCCCCAACATCTGATCAGGTCTTCTCTTGGAAAGTTGCTCCCTTTGATCCTCATGTTGGTCCCGCCATTGATTCAATAAGTGAAGGCCCCGTCATATCTATTCGGTATTCTTTAGATGCAAAGGTCATAGCAATCCAAAGGTCAGATCATGAGATACAATTTCGGAATAGAGAGACTGGGGAAGCATTTAATCATACGTGCAGGACAGAATCTGAAAGCATACTTGGATTTTTTTGGACAGATAGTCATATCTGTGATATTGTTCTTGTAAAGACAAGCGGACTAGACATGTATGCATATAATTCTCAGTCAAAGTCACTGCAATTAGTGGAGACAAAGAAATTGAATGTTAGTTGGTATGTTTACACGCATGAAAGTCGTTTGGTTCTTCTTGCATCTGGAATGCAGTGCAAGACATTTCATGGATTTGAGATTTCATCTGCAGATATTGTCCGCTTGCCAAGGTTTGAGATGGTTATGGCCAAATCTGAAGCAAATAGTAAGCCTGTTTTAGCAGCTGAAGACATCTATATTGTTACTGTTTATGGTAGGATATACTGCCTACAATTTGATAGAGTTGCTATGCTCCTCCATTCGTATAGGCTGTACCGAGATGCTGTGATACAGCAGGGTTCTATGCCAATTTATTCGAGCAGGATTGCTGTGAGTGCAGTGGACAATGTACTTCTTATTCATCAAGTTGATGCAAAGGTTGTTATACTATATGATATATTTGCAGATTCTCGTGCTCCAATATCTGCACCTCTTCCTCTATTGTTAAGGGGTCTCCCAAGGTCCAATTCTTTTTCATCTCGATCAACTGGTAGAGAAAGTGAGAGTGCAGATGCTAATCTTGTGAGTAATCATGGGGCAGTCACCTATGCCGATACGTGGTCTTTCCTAGTTCCTGACCTGATATGTGATGTGGCAAATAAGTTATTGTGGAAGATTCAATTAGACTTAGAGGCAATTTCTGCCAGTAGCTCAGAGGTTCCATCAATATTAGAGTTCTTGCAGAGGCGGAAGTTGGAAGCTAACAAGGCCAAACAATTGTGCTTGGGTATAATACGCACCCTTATTCTAGAGCGTAGGCCTGTATCTATGGTTGCCAAGGCTATACATGTATTAATCACCTCTTACTCCCATTCAATTAAAACCAATCCCCATCTAAGGGGAACTAAATCAGATAAGACATCATCAGCTTCTGGTGCACAACATGGTGTTAGCCCTTTGTCAGGTGCGGATGTGCCTGCTTTGGGAGCGGATGCACTTGGAAAATCTGTTACGCATGAGTCTGCTGCTAGGGTAGACAGTGGATCTCTTAACAAATCTTCAACTGTTTTGAGTTTGGATTCTGAGGGTGAGGCCAGATTTGTTAATCAAAGGCTCTGTACACCTGAGACCCAGGCTCACAGTGCTCATGCTACGCAATCTTCTTTGCAGTCTGGGCAAGAAGAGCCCCAACTTACTTATCCTGCGATTTCACCTGATGAAATGTACAGGTTTGTCTTCGCTCCAGTTGATGAAGAAATGGTCGGAGATCCTTCTTACTTGGTCACTATCATTGTTGAGTTCCTTCACAGTGCTAATGCGGAAAAGGTTCGAGTTCTCCCAAATCTGTATGTTCTAACAATTCAACTGCTGGCCCGTAATGAGCGATATGCAGAACTTGGGTTGTTTGTCATAAACAAGATTCTGGAGCCCTCTAAGGAAGCTGCATTACAACTCCTAGAGTCTGGTCGTCAGAACTCCCAAACTAGGAAGCTAGGGCTGGATATGCTGAGACAGCTTGGTTTACATCAGGATTATGTGTTGTTGCTGGTGCAAGAGGGATACTGCCTGGAAGCCTTAAGATACGCTTGGAAGTACAAGGTGGATACGATCCGGCCATCGTTGTTCCTAGAAGCAGCATTTGTTTCAAAGGACCCCCAACATCTAGCTGCAGTTCTCAGATTCCTCTCGGATTTCCTTCCTGGCTTCAAACACACTTCAGAACATAATAGATACTACCGCATCCTTAATGACATAAGCACTGCTGCTTCTGCTTGA 2199 0.4266 MSGKASSSKPYIDLSGSGGLSHAYIQYPPLQCNNPGSKGLFYDDGNKLLLSPTSDQVFSWKVAPFDPHVGPAIDSISEGPVISIRYSLDAKVIAIQRSDHEIQFRNRETGEAFNHTCRTESESILGFFWTDSHICDIVLVKTSGLDMYAYNSQSKSLQLVETKKLNVSWYVYTHESRLVLLASGMQCKTFHGFEISSADIVRLPRFEMVMAKSEANSKPVLAAEDIYIVTVYGRIYCLQFDRVAMLLHSYRLYRDAVIQQGSMPIYSSRIAVSAVDNVLLIHQVDAKVVILYDIFADSRAPISAPLPLLLRGLPRSNSFSSRSTGRESESADANLVSNHGAVTYADTWSFLVPDLICDVANKLLWKIQLDLEAISASSSEVPSILEFLQRRKLEANKAKQLCLGIIRTLILERRPVSMVAKAIHVLITSYSHSIKTNPHLRGTKSDKTSSASGAQHGVSPLSGADVPALGADALGKSVTHESAARVDSGSLNKSSTVLSLDSEGEARFVNQRLCTPETQAHSAHATQSSLQSGQEEPQLTYPAISPDEMYRFVFAPVDEEMVGDPSYLVTIIVEFLHSANAEKVRVLPNLYVLTIQLLARNERYAELGLFVINKILEPSKEAALQLLESGRQNSQTRKLGLDMLRQLGLHQDYVLLLVQEGYCLEALRYAWKYKVDTIRPSLFLEAAFVSKDPQHLAAVLRFLSDFLPGFKHTSEHNRYYRILNDISTAASA 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0950 732 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 19 724 IPR040371 GO:0010506|GO:0035658
Lele05g0950 732 MobiDBLite consensus disorder prediction 437 457 - -
Lele05g0950 732 MobiDBLite consensus disorder prediction 517 538 - -
Lele05g0950 732 MobiDBLite consensus disorder prediction 437 464 - -
Lele05g0950 732 Pfam Colon cancer-associated protein Mic1-like 565 704 IPR009755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0950 Lele-ChrLele05 5863865 5870233 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0950 05 5863865 5870233 Lele05g0950 05 5863865 5870233 ECH
Lele05g0950 05 5863865 5870233 Lele07g0988 07 5934630 5941166 hybridization
Lele05g0950 05 5863865 5870233 Lele08g0803 08 5034377 5040473 hybridization