Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0815 ATGTCTGGGAAAGCATCAAGTTCAAAGCCTTACATAGATTTGAGTGGATCTGGGGGTCTTTCACATGCTTATATTCAGTATCCGCCATTACAGTGCAACAATCCTGGATCAAAGGGTTTGTTTTATGATGACGGAAATAAACTTCTACTTTCCCCAACATCTGATCAGGTCTTCTCTTGGAAAGTTGTTCCCTTTGATCCTCATGTTGGTCCCACCATTGATTCAATAAGTGAAGGCCCCATCATATCTATTCGGTATTCCTTAGATGCGAAGGTCATAGCAATCCTAAGGTCAGATCATGCGATACAATTTTGGAATAGAGAGACTGGGGAAGCATTTACTCATACTTGCAGGCCAGAATCTAAAAGCATACTTGGATTTTTTTGGACAGATAGTCATATCTGTGATATTGTTCTTGTAAAGACTAGTGGACTAGACATGTATGCATATAATTCTGAGTCAAAGTCACTGCAATTAGTGGAGACAAAGAAATTGAATGTTAGTTGGTATGCTTACACACATGAAAGTCGTTTGGTTCTTCTCGCATCTGGAATGCAGTGCAAGACATTTCATGGATTTCAGATTTCATCTGCAGATGTTGTCCGCTTGCCGAGGTTTGAGATGGCTATGGCCAAATCCGAAGCAAATAGTAAGCCTGTTTTAGCAGCCGAAGACATCTATATTGTTACTGTTTATGGTAGGATATACTGCCTGCAATTCGATAGAGTTGCTATGCTCCTCCATTCATATAGGCTGTACCGTGATGCTGTGATACAGCAGGGTTCTTTGCCAATTTATTCGAGCAGGATTGCTGTGAGTGCAGTGGACAATGTACTTCTTATTCATCAAGTTGATGCAAAGGTTGTTATACTATATGATATATTTGCAGATTCTCGCGCTCCTATATCTGCACCACTTCCTCTGTTGTTAAGGGGTCTCCCAAGGTCCAATTCTTTTTCATCTCGATCAACTGGTAAAGAAAGTGAGGGTTCAGATGCTAATCTTGTGAGTAATCATGGGGCAGTCACCTATGCCAATACGTGGTCTTTCCGAGTTCCTGACCTGATATGTGATGTGGCAAATAAGTTATTGTGGAAGATCCAGTTAGATTTAGAGGCAATTTCTGCCAGTAGCTCAGAGGTTCCGTCAGTATTAGAGTTCTTGCAGAGGCGAAAGTTAGAAGCTAACAAGGCCAAACAATTGTGCTTGGGTATACTACGCACCCTTATTCTAGAGCGTAGGCCTGTATCTATGGTTGCCAAGGCTATACATGTATTAATCACTGCTTACTCCCATTCAATTAAAACCAATCCCCATCTAAGGGGAACTAAATCAGATAAAACATCAGCTTCTGGTGCACAACATGGTGTTAGCCCTTTGTCTGGTGCTGATGTGTCTGTTTTGGGAACAGATGTACTTGGAAAATCTGTTATGCATGAGTCTGCTGCTAGAGTAGACAGTAGATCTCTTAATAAATCTTCAACTGTCTTGAGTTTGGATTCTGAAGGTGAGGCCAGATCTGCTAATCAAAGACGCTATACACCTGAGACCCAGGCTCACAGTGCTCATGCTACGCGATCTTCTTTGCAGTCTGGGCAAGAAGAGCCCCAACTTACTTCTCCAGCGATTTCACCTGATGAGATGTACAGCTTTGTCTTCGCTCCAGTTGATGAAGAAATGGTTGGAGATCCTTCTTACTTGGTCACTGTCATTGTTGAGTTCCTTCACAGTGCTAATGCAGAAAAGGTTCGAGTCCTCCCAAATCTGTATGTTCTAACAATTCAACTGCTGGTCCGTAATGAGCGATATGCAGAACTTGGGTTGTTTGTCATAGACAAGATTCTGGAGCCCTCTAAGGAAGTTGCATTACAACTCCTAGAGTCTGGTCGTCAGAATTCCCAAACTAGGAAGCTAGGGCTGGATATGCTGAGACAGCTTGGTTTACATCAGGATTATGTATTGTTGCTGGTGCAAGATGGATACTACCTGGAAGCCTTAAGATATGCTCGGAAGTACAAGGTGGATACGATCCGGCCATCGTTGTTCCTAGAAGCAGCATTTGTTTCGAAGGACCCCCAACATCTAGCTGCAGTTCTCAGATTCCTCTCGGATTTCCTTCCTGGGTTCCAACACACTTCAGAGCATAATAGATACTACCGCATTCTTAATGACGTAAGCACGCCTGTTTCTGCTTGA 2196 0.4271 MSGKASSSKPYIDLSGSGGLSHAYIQYPPLQCNNPGSKGLFYDDGNKLLLSPTSDQVFSWKVVPFDPHVGPTIDSISEGPIISIRYSLDAKVIAILRSDHAIQFWNRETGEAFTHTCRPESKSILGFFWTDSHICDIVLVKTSGLDMYAYNSESKSLQLVETKKLNVSWYAYTHESRLVLLASGMQCKTFHGFQISSADVVRLPRFEMAMAKSEANSKPVLAAEDIYIVTVYGRIYCLQFDRVAMLLHSYRLYRDAVIQQGSLPIYSSRIAVSAVDNVLLIHQVDAKVVILYDIFADSRAPISAPLPLLLRGLPRSNSFSSRSTGKESEGSDANLVSNHGAVTYANTWSFRVPDLICDVANKLLWKIQLDLEAISASSSEVPSVLEFLQRRKLEANKAKQLCLGILRTLILERRPVSMVAKAIHVLITAYSHSIKTNPHLRGTKSDKTSASGAQHGVSPLSGADVSVLGTDVLGKSVMHESAARVDSRSLNKSSTVLSLDSEGEARSANQRRYTPETQAHSAHATRSSLQSGQEEPQLTSPAISPDEMYSFVFAPVDEEMVGDPSYLVTVIVEFLHSANAEKVRVLPNLYVLTIQLLVRNERYAELGLFVIDKILEPSKEVALQLLESGRQNSQTRKLGLDMLRQLGLHQDYVLLLVQDGYYLEALRYARKYKVDTIRPSLFLEAAFVSKDPQHLAAVLRFLSDFLPGFQHTSEHNRYYRILNDVSTPVSA 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0815 731 MobiDBLite consensus disorder prediction 437 458 - -
Lele06g0815 731 MobiDBLite consensus disorder prediction 493 542 - -
Lele06g0815 731 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 19 720 IPR040371 GO:0010506|GO:0035658
Lele06g0815 731 MobiDBLite consensus disorder prediction 437 456 - -
Lele06g0815 731 Pfam Colon cancer-associated protein Mic1-like 564 703 IPR009755 -
Lele06g0815 731 SUPERFAMILY WD40 repeat-like 42 277 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0815 Lele-ChrLele06 5004447 5010509 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0815 06 5004447 5010509 Lele06g0815 06 5004447 5010509 ECH
Lele06g0815 06 5004447 5010509 Lele07g0988 07 5934630 5941166 hybridization
Lele06g0815 06 5004447 5010509 Lele08g0803 08 5034377 5040473 hybridization