Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0781 ATGCTAGTGACTGTCTTGGGGCGAAACCATGACAGAGAGCTTGGAGTAGTGCTTTTCTGGTGCTTTGGGGCTTCTGTGTTGCTGTGGAGACACGGAAAGAGCAAGTTGAGGAGGGAAACAAAAAGCTTAAATACCGGCGGCCTCCCTCATTCTCTTCCCCAAAAGCACTGTTTCAGGGACGGCTGCTTATTCCCTAACTCACTCTGTTCAGACGCAGGGAGGAGACACCAGTTGCAGAGCTCTCAGCTTCCTCTCTCGCTTCAGACAGATTGGGTGAAAATGGGAGCAGGTGGCCGAGCCTCCGTTCCTCCTGCCCAGAGGAAGACTGAGACTGTGAAGAGAAGCCCGGTGGAGCAGCCGCCGTTTACATTGGGCCAGATCAAGAAAGCCGTGCCGCCTCACTGTTTCAACCGTTCTGTGGCCCGCTCATTCTCCTACGTCCTTTACGACCTCACCATAGCCTTCAGCCTCTATTATGTCGCAACCAATTACTACCATCTCCTCCCACGGCCTCTCTCTTTCTTGGCCTGGCCAATCTACTGGGCAATTCAAGGCTGCATCCTCACCGGCGTCTGGGTGATCGCTCACGAGTGCGGCCATCACGCCTTCAGCGACTACCAATGGCTTGATGACACCGTTGGCTTCGTTCTCCACTCCTCCCTCCTCGTCCCGTACTTCTCATGGAAATACAGCCATCGCCGTCATCACTCTAACACCGGATCTCTTGACCGCGATGAAGTCTTCGTGCCAAAGAAAAAGTCTGGTCTTAGCTGGTACAGTAAATACCTTAACAATCCACCAGGCCGAGTCCTAACCCTTACTGTTACCCTCACTCTTGGCTGGCCTCTCTACCTAGCTTTGAACGTTTCAGGAAGGCCTTATGATCGTTTTGCTTGCCACTATGATCCAAACGGTCCCATCTTCTCAGATCGTGAGCGGCTACAGATATACTTATCGGATGCAGGGGTGCTCGCCGTGTTCTATGGGCTTTACCGTCTTGCGGTGGCGAATGGACTTGCCTGGGTTGTGTGTGTTTATGGAGTGCCATTGTTGGTGGTGAATGGCTTTTTGGTGTTGATCACTTATCTGCAGCATACTCACCCTGCATTGCCACACTATGATTCCTCTGAGTGGGACTGGCTGAAGGGAGCTTTAGCCACGGTAGACAGGGATTATGGTATCTTGAACAAGGTTTTCCATAACATTACAGACACTCATGTAGCACATCACCTGTTCTGCACGATGCCTCATTATCACGCGATGGAGGCTACAAAGGCAATCAAGCCAGTTTTGGGAGGGTATTATCAGTTTGATGGAACGCCAGTTTACAAGGCAGTGTGGAGGGAGGCCAAGGAATGCATTTACGTTGAGTCAGATGAAGGTGCCGATGCCAAAGGGGTATTCTGGTACAAGAACAAGCTCTGA 1425 0.5151 MLVTVLGRNHDRELGVVLFWCFGASVLLWRHGKSKLRRETKSLNTGGLPHSLPQKHCFRDGCLFPNSLCSDAGRRHQLQSSQLPLSLQTDWVKMGAGGRASVPPAQRKTETVKRSPVEQPPFTLGQIKKAVPPHCFNRSVARSFSYVLYDLTIAFSLYYVATNYYHLLPRPLSFLAWPIYWAIQGCILTGVWVIAHECGHHAFSDYQWLDDTVGFVLHSSLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKKKSGLSWYSKYLNNPPGRVLTLTVTLTLGWPLYLALNVSGRPYDRFACHYDPNGPIFSDRERLQIYLSDAGVLAVFYGLYRLAVANGLAWVVCVYGVPLLVVNGFLVLITYLQHTHPALPHYDSSEWDWLKGALATVDRDYGILNKVFHNITDTHVAHHLFCTMPHYHAMEATKAIKPVLGGYYQFDGTPVYKAVWREAKECIYVESDEGADAKGVFWYKNKL 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0781 474 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 98 473 - -
Lele08g0781 474 CDD Delta12-FADS-like 138 420 - -
Lele08g0781 474 Pfam Domain of unknown function (DUF3474) 110 157 IPR021863 GO:0016717
Lele08g0781 474 Pfam Fatty acid desaturase 176 435 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0781 Lele-ChrLele08 4885452 4892126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0781 94 474 Lipid Metabolism Gene Families AT3G12120 76.240 0.0 634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0781 08 4885452 4892126 Lele08g0781 08 4885452 4892126 ECH
Lele05g0925 05 5697660 5702514 Lele08g0781 08 4885452 4892126 hybridization
Lele06g0786 06 4867194 4872094 Lele08g0781 08 4885452 4892126 hybridization