Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0925 ATGCAGACAGCCATGGACGGCTGCGTGTTCCCTAACTCATTCTTTTCAGACGCAGGGAGGACACACCAGTTTCAGAGCTCTCACCTTCCTCTTCCGCTTCAGACGGATTGGGTGAAAATGGGAGCAGGTGGCCGAACCTCCGTTCCTCCGGCCCAGAGGAAAACTGACAGTATAAAGAGAAGCCCGGTGGAGCAGCCCCCTTTCACAGTGGGCCAGATCAAGAAAGCCGTGCCGCCTCACTGTTTCAACCGTTCTGTGGCGCGCTCATTCTCCTACGTCCTTTACGACCTTACCATAGCCTTCAGCCTCTATTATGTCGCCACCCATTTCTTCCATCTCCTCCCACGGCCTCTCTCTTTCTTGGCCTGGCCAATCTACTGGGCCATGCAAGGCTGCGTCCTCACCGGCGTCTGGGTGATTGCTCACGAGTGCGGCCACCACGCCTTCAGCGACTACCAATGGCTTGATGACACCGTTGGCTTCGTCCTCCACTCATCCCTCCTCGTCCCTTACTTCTCATGGAAATACAGCCATCGCCGTCATCACTCTAACACCGGATCCCTTGAGCGCGACGAAGTTTTCGTGCCAAAGAAAAAGTCTGGTCTTAGTTGGTACTCTAAATACCTTAACAATCCACCTGGCCGAGTCCTAACCCTTACTGTTACCCTCACTCTTGGCTGGCCTCTCTACCTAGCTTTGAACGTTTCAGGAAGGCCTTATGATCGTTTTGCTTGCCACTATGATCCAAACGGCCCCATCTTCTCAGATCGGGAGCGGCTACAAATATACTTATCAGATGCAGGGGTGCTCGCCGTGTTCTATGGGCTTTACCGTCTTGCGGTGGCATATGGACTTGCTTGGGTTGTGTGTGTTTATGGAGTGCCATTGCTGGTGGTGAATGGATTTTTGGTGTTGATCACGTATCTGCAGCATACTCACCCTGCGTTGCCGCACTATGATTCCTCTGAGTGGGACTGGTTGAAGGGAGCTTTAGCCACGGTAGACAGAGATTATGGCATCTTGAACAAGGTTTTCCATAACATTACAGACACCCATGTAGCACATCACATGTTCTCCACGATGCCTCATTATCATGCGATGGAGGCTACAAAGGCGATCAAGCCAGTTTTGGGAGAGTATTATCAGTTTGATGGAACACCAGTTTACAAGGCTGTGTGGAGGGAGGCTAAGGAATGCATTTACGTTGAGCCAGATGAAGTTGCGGAGACCAAAGGTGTATTCTGGTACAAGAACAGGCTCTGA 1263 0.5154 MQTAMDGCVFPNSFFSDAGRTHQFQSSHLPLPLQTDWVKMGAGGRTSVPPAQRKTDSIKRSPVEQPPFTVGQIKKAVPPHCFNRSVARSFSYVLYDLTIAFSLYYVATHFFHLLPRPLSFLAWPIYWAMQGCVLTGVWVIAHECGHHAFSDYQWLDDTVGFVLHSSLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKKKSGLSWYSKYLNNPPGRVLTLTVTLTLGWPLYLALNVSGRPYDRFACHYDPNGPIFSDRERLQIYLSDAGVLAVFYGLYRLAVAYGLAWVVCVYGVPLLVVNGFLVLITYLQHTHPALPHYDSSEWDWLKGALATVDRDYGILNKVFHNITDTHVAHHMFSTMPHYHAMEATKAIKPVLGEYYQFDGTPVYKAVWREAKECIYVEPDEVAETKGVFWYKNRL 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0925 420 Pfam Fatty acid desaturase 122 382 IPR005804 GO:0006629
Lele05g0925 420 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 45 418 - -
Lele05g0925 420 MobiDBLite consensus disorder prediction 44 64 - -
Lele05g0925 420 CDD Delta12-FADS-like 84 366 - -
Lele05g0925 420 Pfam Domain of unknown function (DUF3474) 56 103 IPR021863 GO:0016717
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0925 Lele-ChrLele05 5697660 5702514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0925 40 420 Lipid Metabolism Gene Families AT3G12120 76.501 0.0 636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0925 05 5697660 5702514 Lele05g0925 05 5697660 5702514 ECH
Lele05g0925 05 5697660 5702514 Lele07g0963 07 5772829 5776706 hybridization
Lele05g0925 05 5697660 5702514 Lele08g0781 08 4885452 4892126 hybridization