Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0786 ATGTGGAATCGTGACGGTTCAGAAATTGAAGGACAATCAAGATCAAAGGATCGCTGCTTATTCCCTAGCTCACTCTGTTCAGACGCAGGGAGGAGACACCAGTTGCAGAGCTCTCAGCTTCCTCTCTCGCTTCAGACAGATTGGGTGAAAATGGGAGCAGGTGGCCGAGCCTCCGTTCCTCCTGCCCAGAGGAAGACTGAGACTGTGAAGAGAAGCCCGGTGGAGCAGCCCCCGTTCACATTGGGCCAGATCAAGAAAGCCGTGCCGCCTCACTGTTTCAACCGTTCTGTGGCCCGCTCTTTCTCCTACGTCCTTTACGACCTCACCATAGCCTTCAGCCTCTATTATGTCGCTACTCATTACTTCCATCTCCTCCCACGGCCTCTCTCTTTGTTGGCCTGGCCAATCTACTGGGCAATTCAGGGCTGCATCCTCACCGGCGTCTGGGTGATCGCTCACGAGTGCGGCCACCACGCTTTCAGCGACTACCAATGGCTTGATGACACCGTTGGCTTCGTTCTCCACTCCTCCCTCCTCGTCCCCTACTTCTCATGGAAATACAGCCATCGCCGTCATCACTCTAACACCGGTTCTCTTGAGCGCGATGAAGTCTTCGTGCCAAAGAAAAAGTCTGGTCTTAGCTGGTACAGTAAATACCTTAACAATCCCCCAGGCAGAGTCCTAACCCTTACTGTTACCCTCACTCTTGGCTGGCCTCTCTACCTAGCTTTGAACGTTTCAGGAAGGCCATATGATCGTTTTGCTTGCCACTATGATCCAAACGGTCCCATCTTCTCAGATCGTGAGCGGCTACAGATATACTTATCAGATGCAGGGGTGCTCGCCGTGTTCTATGGGCTTTACCGTCTTGCGGTGGCGAATGGACTTGCCTGGGTTGTGTGTGTCTATGGAGTGCCATTGTTGGTGGTGAATGGCTTTTTGGTGTTGATCACTTATCTGCAGCATACTCACCCTGCATTGCCACACTATGATTCTTCTGAGTGGGACTGGTTGAAGGGAGCTTTAGCCACGGTAGACAGGGATTATGGTATCTTGAACAAGGTTTTCCATAACATTACAGACACTCATGTAGCACATCACCTGTTCTCCACGATGCCTCATTATCACGCGATGGAGGCTACAAAGGCAATCAAGCCAGTTTTGGGAGGGTATTATCAGTTTGATGGGACGCCAGTTTACAAGGCAGTGTGGAGGGAGGCCAAGGAATGCATTTACGTTGAGTCAGATGAAGGTGCCGATGCCAAAGGTGTATTCTGGTACAAGAACAAGCTCTGA 1296 0.5123 MWNRDGSEIEGQSRSKDRCLFPSSLCSDAGRRHQLQSSQLPLSLQTDWVKMGAGGRASVPPAQRKTETVKRSPVEQPPFTLGQIKKAVPPHCFNRSVARSFSYVLYDLTIAFSLYYVATHYFHLLPRPLSLLAWPIYWAIQGCILTGVWVIAHECGHHAFSDYQWLDDTVGFVLHSSLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKKKSGLSWYSKYLNNPPGRVLTLTVTLTLGWPLYLALNVSGRPYDRFACHYDPNGPIFSDRERLQIYLSDAGVLAVFYGLYRLAVANGLAWVVCVYGVPLLVVNGFLVLITYLQHTHPALPHYDSSEWDWLKGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPVLGGYYQFDGTPVYKAVWREAKECIYVESDEGADAKGVFWYKNKL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0786 431 CDD Delta12-FADS-like 95 377 - -
Lele06g0786 431 Pfam Domain of unknown function (DUF3474) 67 114 IPR021863 GO:0016717
Lele06g0786 431 Pfam Fatty acid desaturase 133 392 IPR005804 GO:0006629
Lele06g0786 431 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 55 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0786 Lele-ChrLele06 4867194 4872094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0786 51 431 Lipid Metabolism Gene Families AT3G12120 76.762 0.0 635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0786 06 4867194 4872094 Lele06g0786 06 4867194 4872094 ECH
Lele06g0786 06 4867194 4872094 Lele07g0963 07 5772829 5776706 hybridization
Lele06g0786 06 4867194 4872094 Lele08g0781 08 4885452 4892126 hybridization