Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0769 ATGACCGACGCAATTGAGCCCTCTACATCCTCTTCACTGTCGTTTTCGGCCAGAGACCCCAGCACCGTTATTCATCCGAGGCGAGAACCCTTCGAGCATGGCCTCCTGCCCATCCCCAAGCTCATCTTCTCTGACCCCACGCAAACCCTAATCTCCCTGAAGCAGAAGCTTCTTGAGCTATCCCCTAATCAACGGGCCAACTCTGCAGCCATCTCCGACGCTCTCCAGATCTCCATTGACTGCGCCAGGCTCGTTATTGATACCCTCGCCTCGGTATTACACCCGGAGTCCGAACCTTTAGTTAGAGCCAATCCGGAAGAAATCGAATCCGTTGGCGCCGATGTCCATGATCTTATTTTGTTCTTGTACATTCAATCCTACAAGAAGCTGCTTCCCAGAACGCACAAGGACTCTGCGGCCGTGGCCGATGTTTGGCCTTCCACCTCGGCTTTTGATGGCTACCTGTCTGCTCTCTCGCCGTTGCAGCTAGTGCGTAGCAACAGTCGTCGATTTATGCCATCACAAGCTGATGAGGAGGCGCATCAGTTATCATATTTACAAAAGCACCTGGCTAATATTCTGTCTCTTTTAGCTGAGCCTGTGGAGGGGGAAGGGGAAGGGGAAGGGGAACAATTTCTGTCTCTCGGTTCCTTCTTCCAACTGACTCAACTTCGTGGTGTAGGATTTTGCGATTCGTTTAGGGTTTTAACTATGGATAGATTTGAGCACCTTGGGTTTCTAATTGAGTTCGGTGACAAGGGATCTGAAGGAAACACTTTGAGCCAATCATCTCCCTTTTTCGCAAACTCAGATCCTGACATGCCAGCTGTTCCTGTTCCTGCTGCACAAGTTCATGATTGGATTTTGGGAATAATTGCTTCTTCTTTAGAAAATATTTCTGAAAGGGCTTCACTAAAGGAAAATGGGCCTGCCACCTTATCTGATCAGGATGTTGCTATGGTTGATGCATGTACTGTCCCAGTTAAGGCCTCATCAAGTACTAGAGGTCCATGTCTCATTGAAGGGATCTCTAAATCATCATACTCTAAGAATGCATCTGACATTAAAGGTTCATCTGTTAAGGTTCTAAATTGCCAGGAGTCGGCTATTTACATTTTAGCACCTATGAGATATGCCACTGTCTATGGTTGCTCTGATGCTACTATTGTTCTTGGAGCAGTTGGCAAGGCTGTAAGAGTAGAACACTGTGAACGAGTTCATGTGATTGTAGCAGCTAAACGTATATGTATTGCAAATTGTCGTGAATGTGTTTTCTTTTTGGGAGTGAACCAGCAACCTCTTATTGTTGGTGATAACCATAAGCTGCAGGTGAGGTATTTTCCAGTTAAAGGGGTCAGATTTTGGCTTGTTCTCTGTATTAATGTGGCTCCCTACAATACATTTTACTCACATCTAGAGGAGCACATGGCTGAAGCTGGAATTCTTCCCACAGTAAACAGGTGGGATGAAACTGTGGCATTGGGTGCAGTTGATCTTCATGATTCATTATCTCATCCAGCTGGTGTTTCTGATGTTCAAGCTGAGTCTGCTACTCGGGTAGATCCTGATCAGTTCACCGATTTTGTGATTCCAGACTGGCTTGGAGGAGAGTCGACTGAGTCTACAAAACACAACCCATTCACCTTACCAGATGCTTATATGGCTTCGCAGCTTAGAAATCAAAAGAATTTAGGAGAGATAAGGCAACTCTTGCGGGAAGCACCCCTTGAAGAAAATCGCAAAAGAGAATTGTCATCTGCGCTTCATGTTTGCTTCAAGGACTGGTTATATGAGCAGATGCATCCGGAAACATTCGGCAACTCTACTGTCTACAAGGCGAATGATCTTTGTGAGGCAACGCCATGA 1866 0.4609 MTDAIEPSTSSSLSFSARDPSTVIHPRREPFEHGLLPIPKLIFSDPTQTLISLKQKLLELSPNQRANSAAISDALQISIDCARLVIDTLASVLHPESEPLVRANPEEIESVGADVHDLILFLYIQSYKKLLPRTHKDSAAVADVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHLANILSLLAEPVEGEGEGEGEQFLSLGSFFQLTQLRGVGFCDSFRVLTMDRFEHLGFLIEFGDKGSEGNTLSQSSPFFANSDPDMPAVPVPAAQVHDWILGIIASSLENISERASLKENGPATLSDQDVAMVDACTVPVKASSSTRGPCLIEGISKSSYSKNASDIKGSSVKVLNCQESAIYILAPMRYATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKRICIANCRECVFFLGVNQQPLIVGDNHKLQVRYFPVKGVRFWLVLCINVAPYNTFYSHLEEHMAEAGILPTVNRWDETVALGAVDLHDSLSHPAGVSDVQAESATRVDPDQFTDFVIPDWLGGESTESTKHNPFTLPDAYMASQLRNQKNLGEIRQLLREAPLEENRKRELSSALHVCFKDWLYEQMHPETFGNSTVYKANDLCEATP 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0769 621 MobiDBLite consensus disorder prediction 1 19 - -
Lele08g0769 621 Pfam Tubulin binding cofactor C 357 447 IPR012945 -
Lele08g0769 621 PANTHER UNCHARACTERIZED 20 598 IPR039589 -
Lele08g0769 621 SMART carp 403 437 IPR006599 -
Lele08g0769 621 SMART carp 365 402 IPR006599 -
Lele08g0769 621 ProSiteProfiles C-CAP/cofactor C-like domain profile. 327 481 IPR017901 -
Lele08g0769 621 MobiDBLite consensus disorder prediction 1 20 - -
Lele08g0769 621 Gene3D - 338 500 IPR016098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0769 Lele-ChrLele08 4806100 4812507 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0769 08 4806100 4812507 Lele08g0769 08 4806100 4812507 ECH
Lele05g0911 05 5616297 5625033 Lele08g0769 08 4806100 4812507 hybridization
Lele06g0772 06 4755900 4762210 Lele08g0769 08 4806100 4812507 hybridization