Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0772 ATGACCGACGCAATCGAGCCCTCTACATCCTCTTCACTGTCGTTTTCGGCGAGCGACCCCAGCACCGTTATTCATCCGAGGCGAGCACCCTTCGAGCATGGCCTCCTGCCCATCCCCAAGCTCATCTTCTCCGACCCCACGCAAACCCTAATCTCCCTGAAGCAGAAGCTTCTTCAGCTATCCCCTAATCAACGGGCCAACTCTGCAGCCATCTCCGACGCTCTCCAGATCTCCATTGACTGCGCCAGGCTCGTTATCGATACCCTCGCCTCGGTATTACACCCGGAGTCCGAACCTTTAGTTAGAGCCAATCCCGAAGAAATCGAATCCGTAGGTGCCGATGTCCATGATCTTATTTTGTTCTTGTACATTCAATCCTACAAGAAACTGCTTCCCAGAACGCACAAGGACTCTGCGGCCGTGGCGGATGTTTGGCCTTCCACCTCGGCTTTTGATGGCTACCTGTCTGCTCTCTCGCCGTTGCAGCTAGTGCGTAGCAACAGTCGTCGATTTATGCCATCACAAGCTGATGAGGAGGCGCATCAGTTATCATATTTACAAAAGCACCTGGCTAACATTCTGTCTCTTTTAGCTGAGCCTGTGGAGGGGGAAGGGGAAGAATTTCTGGTTTTAACTATGGATAGATTTGAGCACCTTGGGTTTCTAATTCAGTTCGGTGACAAGGGATCCGAAGGAAACACTTTGAGCCAATCATCTCCCTTTTTTGCAAACTCAGATCCTGACATGCCAGCTGTTCCTGTTCCTGCTGCACAAGTTCATGATTGGATTTTGGGAATAATTGCTTCTTCTTTAGAAAATATTTCTGAAAGGGCTTCACTAAAGGAAAATGGGCCTGCCAGCGTATCTGATCAGGATGTTGCTATGGTTGATGCATGTAGTGTACCAGTTAAGGCCTCACCAACTACTAGAGGTCCATGTTTCATTGAAGGGATCTCTAAATCATCATACTCTAAGAATGCATCTGACATTAAAGGTTCATCTGTTAAGGTTCTAAATTGCCAGGAGTCGGCTATTTACATTTTAGCACCTGTGAGATATGCCACTGTCTATGGTTGCTCGGATGCTACTATTGTTCTTGGAGCAGTTGGCAAGGCTGTAAGAGTAGAACACTGTGAACGAGTTCATGTGATTGTAGCAGCTAAACGTATATGTATTGCAAATTGTCGTGAATGTGTTTTCTTTTTGGGAGTGAACCAGCAACCTCTTATTGTTGGTGATAACCATAAGCTGCAGGTGGCTCCCTACAATACATTCTACTCCCATCTAGAGGAGCACATGGCTGAAGCTGGAATTCTTCCCACAGTAAACAGGTGGGATGAAACTGTGGCATTGGGTGCAGTTGATCTTCATGATTCATTATCTCATCCAGCTGGTGTTTCTGATGTTCAAGCTGAGTCTGCTACTCGGGTAGATCCTGACCAGTTCATCGATTTTGTGATTCCAGACTGGCTTGGAGGAGAGTCGAGTGAGTCTACAAAACACAACCCATTCACCTTACCAGATGCTTATATGGCTTCGCAGCTTAGAAATCAAAAGAATTTAGGAGAGATTAGGCAACTCTTGCGGGAAACACCCCTTGAAGAAAATCGCAAAAGAGAATTGTCATCTGCGCTTCATGTTTGCTTCAAGGACTGGTTATATGCATCCGGAAACATTCGGCAACTCTACTGTCTACAAGGCGAATGA 1707 0.4657 MTDAIEPSTSSSLSFSASDPSTVIHPRRAPFEHGLLPIPKLIFSDPTQTLISLKQKLLQLSPNQRANSAAISDALQISIDCARLVIDTLASVLHPESEPLVRANPEEIESVGADVHDLILFLYIQSYKKLLPRTHKDSAAVADVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHLANILSLLAEPVEGEGEEFLVLTMDRFEHLGFLIQFGDKGSEGNTLSQSSPFFANSDPDMPAVPVPAAQVHDWILGIIASSLENISERASLKENGPASVSDQDVAMVDACSVPVKASPTTRGPCFIEGISKSSYSKNASDIKGSSVKVLNCQESAIYILAPVRYATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKRICIANCRECVFFLGVNQQPLIVGDNHKLQVAPYNTFYSHLEEHMAEAGILPTVNRWDETVALGAVDLHDSLSHPAGVSDVQAESATRVDPDQFIDFVIPDWLGGESSESTKHNPFTLPDAYMASQLRNQKNLGEIRQLLRETPLEENRKRELSSALHVCFKDWLYASGNIRQLYCLQGE 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0772 568 MobiDBLite consensus disorder prediction 1 21 - -
Lele06g0772 568 ProSiteProfiles C-CAP/cofactor C-like domain profile. 302 438 IPR017901 -
Lele06g0772 568 SMART carp 378 412 IPR006599 -
Lele06g0772 568 SMART carp 340 377 IPR006599 -
Lele06g0772 568 Gene3D - 313 457 IPR016098 -
Lele06g0772 568 PANTHER UNCHARACTERIZED 20 566 IPR039589 -
Lele06g0772 568 Pfam Tubulin binding cofactor C 332 447 IPR012945 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0772 Lele-ChrLele06 4755900 4762210 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0772 06 4755900 4762210 Lele06g0772 06 4755900 4762210 ECH
Lele06g0772 06 4755900 4762210 Lele07g0950 07 5695433 5696778 hybridization
Lele06g0772 06 4755900 4762210 Lele08g0769 08 4806100 4812507 hybridization