Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0911 ATGAAGCAGGTCAACAATCCCCACACGAGTCAGTGCATAAGCTATCAAGCTGTCCAATGGTTACATATTTTAAGATATGGAGCAGACCAAAGGACAAGAATATACCCTAAAACCTTTCACCTTTCTCATCCTCGTTATCTCGCGCGCTCTCTCAATTCACATTGTTTTCTCTATCTAGCGATGACCGAGGCAATTGAGCCCTCTACATCCTCTTCATTGTCGTCGTCGGCCAGAGACCCGAGCACCGTTATTCATCCGAGGCGCGATCCCTTCGAGCATGGCCTCTTGCCCATCCCCAAGCTCATTTTCTCTGACCCCACGCAAACCCTAATTTCCTTGAAGCAGAAGCTTCTTGAGCTATCCCCTGATCAACGGGCCAATTTTGCGTCCATCTCTGACGCTCTTCAGATCTCCAATGACTGCGCCAGGCTCGTTCTCGATACCCTCGCCTCGGTATTACACTCGGAGTCCGAACCTTTGGTTAGGGCCATGCCCGAAGAAATCGAGTCCGTCGGTGCAGATGTCCATGATCTGGTTTTGTTCTTGTACATTCAATCCTACAAGAAGCTGCTTCCCAGAACGCACAAGGACTCTGCCGCCGTGGCTGATGTTTGGCCTTCAACCTCGGCTTTTGATGGCTACCTGTCCGCTCTCTCACCGTTGCAGCTAGTGCGTAGCAACAGTCGTCGATTTATGCCATCACAAGCTGATGAGGAGGCGCATCAGTTATCATATTTGCAAAAGCACCTGGCTAACATTCTGTCTCTTTTAGCCGAGCCTGTGGAGGGGGAAGGGGAAGAATCTCTGGTTTTAACTATGGATAGATTTGAGCACCTTGGGTTTCTAATTCAGTTCGGTGACAAGGAATCTGAAGGAAACACTTTGAGCCAATCATCTCCCTTTTTTGCTAACTCGGATCCTGACATGCCAGCTGTTCCTGTTCCTGCTGCACAAGTTCATGATTGGCTTCTGCAAAATATTGCTTCTTCTTTAGAAAATATTTCTGAAAGGGCTTCACTTAAGGAAAATGGACCTGCCAGCGTATCTGATCAGGATGTTGCTATGGTTGATGCATGTACTGCCCCAGTTAAAGCTTCACCAAGTACTAGAGGTCCATGTTTCATTGAAGGGATCTCTAAATCATCATACTCTAAGAATGCATCTGATATTAAAGGTTCATCTGTTAAGGTTCTAAATTGCCATGAGTCGGCTATTTACATTTTAGCACCTGTGAGATATGCCACTGTCTATGGTTGCTCGGATGCTACTATTGTTCTTGGAGCAGTTGGCAAGGCTGTAAGAGTAGAACACTGTGAACGAGTCCATGTGATTGTAGCAGCTAAACGTATATGTATTGCAAATTGTCGTGAATGTGTTTTCTTTTTGGGAGTGAACCAGCAACCTCTTATTGTTGGTGATAACCATAAGCTGCAGGTGGCACCCTACAATACATTTTACTCCCAGCTAGAGGAGCACATGGCTGAAGCTGGAATTCTGCCCACAGTAAACAGGTGGGATGAAACTGTGGCATTGGGTGCAGTTGATCTTCATGATTCATTATCTCATCCAGCTGGTGTCTCTGATGTTCAAGCTGAGTCAGCTACTCGGGTAGATCCTGACCAGTTCACCGATTTTGTGATTCCAGACTGGCTTGGAGGAGAATCGACTGAGTCTACAAAACACAACCCATTCACCTTACCAGAGGCTTATATGGCTTCGCAGCTTAGAAATCAAAAGAATTTAGGAGAGATAAGGCAACTCTTGCGGGAAGCACCCCTTGAAGAAAATCGTAAAAGAGAATTGTCATCTGCGCTTCATGTTTGCTTCAAGGACTGGTTATATGCATCCGGAAACATTCGGCAACTCTACTGTCTACAAGGCGAATGA 1887 0.4616 MKQVNNPHTSQCISYQAVQWLHILRYGADQRTRIYPKTFHLSHPRYLARSLNSHCFLYLAMTEAIEPSTSSSLSSSARDPSTVIHPRRDPFEHGLLPIPKLIFSDPTQTLISLKQKLLELSPDQRANFASISDALQISNDCARLVLDTLASVLHSESEPLVRAMPEEIESVGADVHDLVLFLYIQSYKKLLPRTHKDSAAVADVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHLANILSLLAEPVEGEGEESLVLTMDRFEHLGFLIQFGDKESEGNTLSQSSPFFANSDPDMPAVPVPAAQVHDWLLQNIASSLENISERASLKENGPASVSDQDVAMVDACTAPVKASPSTRGPCFIEGISKSSYSKNASDIKGSSVKVLNCHESAIYILAPVRYATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKRICIANCRECVFFLGVNQQPLIVGDNHKLQVAPYNTFYSQLEEHMAEAGILPTVNRWDETVALGAVDLHDSLSHPAGVSDVQAESATRVDPDQFTDFVIPDWLGGESTESTKHNPFTLPEAYMASQLRNQKNLGEIRQLLREAPLEENRKRELSSALHVCFKDWLYASGNIRQLYCLQGE 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0911 628 SMART carp 400 437 IPR006599 -
Lele05g0911 628 SMART carp 438 472 IPR006599 -
Lele05g0911 628 Gene3D - 373 518 IPR016098 -
Lele05g0911 628 PANTHER UNCHARACTERIZED 80 626 IPR039589 -
Lele05g0911 628 Pfam Tubulin binding cofactor C 392 507 IPR012945 -
Lele05g0911 628 ProSiteProfiles C-CAP/cofactor C-like domain profile. 362 498 IPR017901 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0911 Lele-ChrLele05 5616297 5625033 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0911 05 5616297 5625033 Lele05g0911 05 5616297 5625033 ECH
Lele05g0911 05 5616297 5625033 Lele07g0950 07 5695433 5696778 hybridization
Lele05g0911 05 5616297 5625033 Lele08g0769 08 4806100 4812507 hybridization