Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0642 ATGTTTGCAAACACGCGTATGCGTAACATTTTGCAAAGCGGACTGTTCTTTAATCACCTCCAGCTTGTGACGGTGCCAAGCTTGGAGGACTCTCCTCGTTTAATGACTGCGGTCTTAAGAGCTGGAGTTGACAAAATCTGGAATCATACCGCCTGTGCTAGTGTTATTGGAGCTAATGGATTAGAGGCTGCCAGTTTTTGGGAAAGTGGCAATGCCGGTTGTTTGAACTTTGAGACTAGATGTTTATCACTTTTAGCTAGTCATAAAATATTTCATTCTTTACTCAAAAGTATTCCAGACTATTTGAAGATAGTGGAGGTTGGTCCAAGGGATGGATTACAGAATGAGAATAATATAGTTCCTACTGTTGTGAAAGTTGAATTGATAAAACTGCTAGTTTCTTCTGGGTTGCCAGTTGTCGAGGCTACAAGTTTTGTGTCACCAAAATGGGTTCCACAGCTTGCAGATGCAAAGGATGTAATGGCTGCAATTCAGAATGTTGATGTTGCTAGATTTCCTGTATTAACTCTTAATCTTAAAGGTTTTGAGGCCGCTGTTGCTGCTGGCGCAAAGGAAGTGGCTGTATTTCCTGCAGCTTCAGAATCATTCTCTAAAGCAAATCTAAACTGTAGCATTCAGGATAATCTTGCTCAATGCCGTGATATTGCTTCAACTGCGAGCAAGCTCTCAATTCCTGTTCGTGGATATATATCTTGTGTCGTGGGGTGTCCTCTGGAAGGATCTGTTGCTCCAGCTAAAGTAGCTTACGTAGCAAAAGCACTCTATGATATGGGTTGCTCAGAGATTTCACTAGGCGATATCATTGGTGTTGGCACACCTGGTACTGTCATTCCAATGCTTGAAGCTGTTCTTGATGTTGTCCCCGTTGACAAACTTGCTGTTCATTTTCATGATACTTATGGTCAGGCTCTTTCAAATACTCGTCTCACTTCAGCCTGTGGAAGGTTTTCTGCTTCTGCTCTTGCCTGTATGGGGATAAGCACGGTTGATTCATCAGTGTCTGGTCTTGGGGGTTGCCCATATGCGAAGGGTGCAACTGGGAATGTTGCCACAGAGGATGTTGTGTACTTGTTGAATGGACTGGGAGTGAAAACCAATGTTGACCTTAGAAAGCTTATGGTGGCTGGGGATTATATCTGTAAGCATTTCGGGCGTGCTTCTGGTTCTAAAGCTGCAACTGCTTTGACTAAACTTTCAGCTAATGCCTCCAAACCGTGA 1239 0.4334 MFANTRMRNILQSGLFFNHLQLVTVPSLEDSPRLMTAVLRAGVDKIWNHTACASVIGANGLEAASFWESGNAGCLNFETRCLSLLASHKIFHSLLKSIPDYLKIVEVGPRDGLQNENNIVPTVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVDVARFPVLTLNLKGFEAAVAAGAKEVAVFPAASESFSKANLNCSIQDNLAQCRDIASTASKLSIPVRGYISCVVGCPLEGSVAPAKVAYVAKALYDMGCSEISLGDIIGVGTPGTVIPMLEAVLDVVPVDKLAVHFHDTYGQALSNTRLTSACGRFSASALACMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYLLNGLGVKTNVDLRKLMVAGDYICKHFGRASGSKAATALTKLSANASKP 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0642 412 CDD DRE_TIM_HMGL 104 388 - -
Lele08g0642 412 Gene3D Aldolase class I 95 405 IPR013785 -
Lele08g0642 412 FunFam Hydroxymethylglutaryl-CoA lyase 97 406 - -
Lele08g0642 412 Pfam HMGL-like 102 386 IPR000891 GO:0003824
Lele08g0642 412 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 91 405 IPR043594 GO:0016833
Lele08g0642 412 ProSiteProfiles Pyruvate carboxyltransferase domain. 102 380 IPR000891 GO:0003824
Lele08g0642 412 SUPERFAMILY Aldolase 97 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0642 Lele-ChrLele08 3876192 3880199 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0642 08 3876192 3880199 Lele08g0642 08 3876192 3880199 ECH
Lele05g0796 05 4738076 4741917 Lele08g0642 08 3876192 3880199 hybridization
Lele06g0643 06 3835295 3839432 Lele08g0642 08 3876192 3880199 hybridization