Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0643 ATGTTTGCAAACATGCGTATGCGTAACATTTTGCAAAGCGGACTGTTCTTTAATCACCTCCAGCTTGTGACGGTGCCAAGCTTGGAGGACTCTCCTCGTTTAATGACTGGGGTCTTAAGAGCTGGAGTTGACAAAATCTGGAATCATACCGCCTGGGCTAGTGTTATTGGAGCTACTGGATTAGAGGCTGCCAGTTTTTGGGAAAGTGGCAAGGGAATTCGTCATTTTACGCCTGATAGCAATGATCGATGTACTGCGAAGGAGTTCTCTAGTAAGTTACTCAAAAGTATTCCAGACTATGTGAAGATAGTGGAGGTTGGTCCAAGGGATGGATTACAGAATGAGAATAATATAGTTCCTACTGTTGTGAAAGTTGAATTGATAAAACTGCTAGTTTCTTCTGGGTTGCCTGTTGTCGAGGCTACAAGTTTTGTGTCACCAAAATGGGTTCCACAGCTTGCAGATGCAAAGGATGGTTTTGAGGCCGCTGTTGCTGCTGGTGCAAAGGAAGTGGCTGTTTTTCCTGCAGCTTCAGAATCATTCTCTAAAGCAAATCTAAACTGTAGCATTGAGGATAATCTTGCTCGATGCCGTGATATTGCTTCAACTGCGAGCAAGATCTCGATTCCTGTTCGTGGATATATATCTTGTGTCGTCGGGTGTCCTCTAGAAGGATCTGTTGCTCCAGCTAAAGTAGCTTACGTGGCAAAAACACTCTATGATATGGGTTGCTCAGAGATTTCACTAGGCGATACCATTGGTGTTGGCACACCTGGTACTGTCATTCCAATGCTTGAAGCTGTTCTAGATGTTGTCCCCGTTGACAAACTTGCTGTTCATTTTCATGATACTTATGGTCAGGCTCTTTCAAATACTCTTGTCTCACTTCAGATGGGGATCAGCACGGTGGATTCATCAGTGTCTGGTCTTGGGGGTTGCCCATATGCGAAGGGTGCAACTGGGAATGTTGCCACAGAGGATGTTGTGTACTTGTTGAATGGACTGGGAGTGAAAACCAATGTTGACCTTAGAAAGCTTATGGTGGCTGGGGACTATATATGCAAGCATTTAGGGCGTGCTTCTGGTTCTAAAGCTGCATCTGCTTTGACTAAACTTTCAGCTAATGCCTCCAAACCGTGA 1140 0.4474 MFANMRMRNILQSGLFFNHLQLVTVPSLEDSPRLMTGVLRAGVDKIWNHTAWASVIGATGLEAASFWESGKGIRHFTPDSNDRCTAKEFSSKLLKSIPDYVKIVEVGPRDGLQNENNIVPTVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDGFEAAVAAGAKEVAVFPAASESFSKANLNCSIEDNLARCRDIASTASKISIPVRGYISCVVGCPLEGSVAPAKVAYVAKTLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDVVPVDKLAVHFHDTYGQALSNTLVSLQMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYLLNGLGVKTNVDLRKLMVAGDYICKHLGRASGSKAASALTKLSANASKP 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0643 379 Gene3D Aldolase class I 94 372 IPR013785 -
Lele06g0643 379 CDD DRE_TIM_HMGL 103 355 - -
Lele06g0643 379 SUPERFAMILY Aldolase 96 363 - -
Lele06g0643 379 ProSiteProfiles Pyruvate carboxyltransferase domain. 101 347 IPR000891 GO:0003824
Lele06g0643 379 Pfam HMGL-like 155 353 IPR000891 GO:0003824
Lele06g0643 379 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 159 372 IPR043594 GO:0016833
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0643 Lele-ChrLele06 3835295 3839432 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0643 06 3835295 3839432 Lele06g0643 06 3835295 3839432 ECH
Lele06g0643 06 3835295 3839432 Lele07g0836 07 4801065 4804943 hybridization
Lele06g0643 06 3835295 3839432 Lele08g0642 08 3876192 3880199 hybridization