Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0796 ATGTTTGCAAACATGCGTATGCGTGATATATTGCAAAGAGGACTGCTCTTTAATCGCTTTCAGCTTTTGACGATGCCAAGCTTCGAGGACTCTCCTCGTTTAATGACTGGGGTTTCAAGAGCTGGAGTTGACAAAATCTGGAATCATACCGCTTGTGCTAGTTTTATTGGAGCTAACGGATTAGAGGCTGCCAGTTTTTGGAAAAGTGGCAAGGGAATTCGTCATTTTACGTCTGATAGCAATGATCGATGTACTGCAAAGGAGTTCTCTAGTAAGTTACTTAAAAGTATTCCAGATTATGTGAAGATAGTGGAGGTTGGTCCAAGGGATGGATTACAGAATGAGAAGAATATAGTTCCTACTGTCGTGAAAGTTGAATTGATAAAAATGCTAGTTTCTTCTGGGTTGACCGTTGTCGAGGCTACAAGTTTTGTGTCACCAAAATGGGTACCACAGCTTGCAGATGCAAAGGATGTAATGGCTGCTATTCAGAATGTAGATGGTGCTAGATTTCCTGTCTTAACTCCTAATCTTAAAGGTTTTGAGGCAGCTGTTGCTGCTGGTGCAAAGGAAGTGGCTGTTTTTCCTGCAGCTTCAGAATCATTCTCTAAAGCAAACCTAAACTGTAGCATTGAGGATAATCTTGCTCGATGCCGTGATATTGCTTCAGCTGCTAGCAAGCTCTCAATACCCGTTCGTGGATATATATCTTGTGTTGTGGGGTGTCCTCTGGAAGGATTTGTTGCTCCAGCTAAAGTAGCATACGTGGCAAAAGCACTCTATGATATGGGTTGCTCAGAGATTTCACTAGGCGATACCATTGGTGTTGGCACACCTGGTACTGTCATTCCAATGCTTGAAGCTGTTCTTGATGTTGTCCCTGTTGACAAACTTGCTGTTCATTTTCACGACACCTATGGTCAGGCTCTTTCAAATACTCTCGTCTCACTTCAGATGGGGATAAGCACGGTGGATTCATCAGTGTCTGGTCTTGGGGGTTGCCCATATGCGAAGGGTGCAACTGGGAATGTTGCAACAGAGGATGTTGTGTACTTGTTGAATGGACTGGGAGTGAAAACCAATGTTGACCTTAGAAAGCTTATGGTGGCTGGTGATTATATCTGCAAGCATTTAGGGCGTGCTTCTGGTTCTAAAGCTGCAACTGCGTTGACTAAACTTACAGCTAATGCCTCCAAACTGTGA 1203 0.4356 MFANMRMRDILQRGLLFNRFQLLTMPSFEDSPRLMTGVSRAGVDKIWNHTACASFIGANGLEAASFWKSGKGIRHFTSDSNDRCTAKEFSSKLLKSIPDYVKIVEVGPRDGLQNEKNIVPTVVKVELIKMLVSSGLTVVEATSFVSPKWVPQLADAKDVMAAIQNVDGARFPVLTPNLKGFEAAVAAGAKEVAVFPAASESFSKANLNCSIEDNLARCRDIASAASKLSIPVRGYISCVVGCPLEGFVAPAKVAYVAKALYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDVVPVDKLAVHFHDTYGQALSNTLVSLQMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYLLNGLGVKTNVDLRKLMVAGDYICKHLGRASGSKAATALTKLTANASKL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0796 400 ProSiteProfiles Pyruvate carboxyltransferase domain. 101 368 IPR000891 GO:0003824
Lele05g0796 400 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 85 394 IPR043594 GO:0016833
Lele05g0796 400 Pfam HMGL-like 101 374 IPR000891 GO:0003824
Lele05g0796 400 Gene3D Aldolase class I 94 393 IPR013785 -
Lele05g0796 400 CDD DRE_TIM_HMGL 103 376 - -
Lele05g0796 400 FunFam Hydroxymethylglutaryl-CoA lyase, mitochondrial 95 393 - -
Lele05g0796 400 SUPERFAMILY Aldolase 96 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0796 Lele-ChrLele05 4738076 4741917 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0796 05 4738076 4741917 Lele05g0796 05 4738076 4741917 ECH
Lele05g0796 05 4738076 4741917 Lele07g0836 07 4801065 4804943 hybridization
Lele05g0796 05 4738076 4741917 Lele08g0642 08 3876192 3880199 hybridization