Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0629 ATGGATTCCTCATCCGCTTCCATTGATGGCTTTTCTGGATCCAAGGACAAGGAGTCAATGGTTGACCCCTTCTTGGTTGAAGCTCTTCAGAACTCTCGCCATCGTCTCACCATTTTGCGTATGGAACTTGATATTCAGAGGTTCCTGAATAACACTGATCAGCAGCATTTTGAGTTCCAGCACTTCCCTTCTTCCTATCTTCGACTGGCAGCACATCGCGTTGCTCAACACTATGGTATGCAAACTATGATTCAGGATTATAGTGTGGATGGACATGGAAGTAAGATAGCGGTGAGAAAGTTAGCAGAAAGCAGGTATCCTGCAGTCCGTTTGTCTGAAATACCTGCCAAACAGCCGGAAAATGATAAACCTGAGCAGATAAAAATTGTCATAAGGCCTAGACCTAATAAAAGCAATGCAAATGAAATCAATGAAGCAGGACTGAAAGGAAATCCTATGAGAAGTGTGGAAGAGAGGAAGGAGGAATATGATCGGGCACGAGCACGCATCTTCAGTGGCAGTTCTGATGCAAGTGATGCATTGTCCCAGGTCCCTGTGGATGGAAGAAATTGCAGTTTGGGCAAGGATGAGAATGAAGCTGGCAAGAACACTATGGTTGATTCAGAAAAATGCACCAGTATCAGGGACACTGGTTCCAATTGTGTTGCCATTTTAAGAGATAGGGAGAAGGATCGTAGTGATCCAGATTATGATCGTAGCTATGGAAGGTATGCTAGGAGTATTCCAAACGTTAACTTGGTGCCTTTTGGTCTTCACAAAGTTCCACCTTCATTTGCTCAATATGACAGTAATTTCAATCAGCGGGGTCAGATGTCACAAACTCAACCTTCACTTGGCTATGGACCCCCTTCAAGCCCAATAATGAGTCCTTTTTGTGCTACAGGATTGAATCAGATGTCTGGGGATGTTACTTACCTGCAGTGGCCAAGTGCTGCTATGATGTATGCACATTCATATGACCAATTTAGACATGCTGTTTTTCAGGCGCCATTTGGACAACAGCCGCTGAGCTTTGATTATCCGCAGAACTACTAG 1056 0.4422 MDSSSASIDGFSGSKDKESMVDPFLVEALQNSRHRLTILRMELDIQRFLNNTDQQHFEFQHFPSSYLRLAAHRVAQHYGMQTMIQDYSVDGHGSKIAVRKLAESRYPAVRLSEIPAKQPENDKPEQIKIVIRPRPNKSNANEINEAGLKGNPMRSVEERKEEYDRARARIFSGSSDASDALSQVPVDGRNCSLGKDENEAGKNTMVDSEKCTSIRDTGSNCVAILRDREKDRSDPDYDRSYGRYARSIPNVNLVPFGLHKVPPSFAQYDSNFNQRGQMSQTQPSLGYGPPSSPIMSPFCATGLNQMSGDVTYLQWPSAAMMYAHSYDQFRHAVFQAPFGQQPLSFDYPQNY 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0629 351 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 14 338 - -
Lele08g0629 351 Pfam SUZ domain 126 174 IPR024771 -
Lele08g0629 351 Gene3D - 12 134 IPR036867 GO:0003676
Lele08g0629 351 SUPERFAMILY R3H domain 12 136 IPR036867 GO:0003676
Lele08g0629 351 MobiDBLite consensus disorder prediction 176 200 - -
Lele08g0629 351 ProSiteProfiles R3H domain profile. 35 102 IPR001374 GO:0003676
Lele08g0629 351 ProSiteProfiles SUZ domain profile. 105 175 IPR024771 -
Lele08g0629 351 Pfam R3H domain 37 86 IPR001374 GO:0003676
Lele08g0629 351 CDD R3H_encore_like 34 100 - -
Lele08g0629 351 SMART R3H_4 19 101 IPR001374 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0629 Lele-ChrLele08 3801833 3805143 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0629 08 3801833 3805143 Lele08g0629 08 3801833 3805143 ECH
Lele05g0789 05 4668982 4672245 Lele08g0629 08 3801833 3805143 hybridization
Lele06g0631 06 3758187 3766256 Lele08g0629 08 3801833 3805143 hybridization