Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0631 ATGAAGGAGCTATGGAGGGTTTCAAGTCTCAACCAAGACTTGGAGGTTTTGGACAATGACGACGTTTCCGCATCATTTCCTCATGTTGATGGGGATTATTCTGTTTCACTACATGGGCCTACGGTTGACGCGCCTCAGATTTGGCGTGGAATGAGCCGGCCGGTTTTAATTGGCGCGGGGAGATATACACAAGAGGGGTGCGAGATGTCAGTTTTGCGTATGGAACTTGATATTCAGAGGTTCCTGAATAACACTGATCAGCAGCATTTTGAGTTCCAGCACTTCCCTTCTTCCTATCTTCGACTGGCAGCACATCGCGTTGCTCAACACTATGGTATGCAAACTATGATTCAGGATTATAGTGTGGATGGACAGGGAAGTAAAATAGTGGTGAGAAAGTTAGCAGAAAGCAGGTATCCTGCAGTCCGTTTGTCTGAAATACCTGCCAAACAGCCGGAAAATGATAAACCTGAGCAGATAAAAATTGTCATAAGGCCTAGACCTAATAAAAGCAATGCAAATGAAATCAATGAAGCAGGACTGAAAGGAAATCCTATGAGAAGTGTGGAAGAGAGGAAGGAGGACTATGATCGGGCACGAGCACGCATCTTCAGTGGCAGTTCTGATGCAAGTGATGCATTGTCCCTGGTCCCTGTGGATGGAACGAATTGCAGTTTGGGCAAGGATGAGAATGAAGCTGGCAAGAACCCTATGGTTGATTCAGAAAAATGCACCAGTATCAGGGACACTGGTTCCAATCGTGTTGCCATTTTAAGAGACAGGGAGAAGGATCGTAGTGATCCAGATTATGATCGTAGCTATGGAAGGTATGCTAGGAGTATTCCAAACGTTAACTTGGTGCCTTTTGGTCTTCACAAAGTTCCACCTTCATTTGCTCAATATGACAGTAATTTCAATCAGCTGGGTCAGATGTCACAAACTCAACCTTCACTTGGCTATGGACCCCCTTCAAGCCCAATAATGAGTCCTTTTACAGGATTGAATCAGATGTCTGGGGATGTTACTTACCTGCAGTGGCCAAGTACTGCTATGATGTATGCACATTCATATGACCAATTTAGACATGCTGTTTTTCAGGTTTTCATCGATACAAACTATTTTCTTCCCAAACGTTGTTGGGGAGGCAAGATGTTAGATGTTGTTCAGAAAGACAGATGTTTAGATGATGTCATATTGCTTTCTAAATTCCCGAATATGATGGTGAAAGCCCAATCCAACTATTTACGCTCGTCGTGTTGCTTGTCTGGAATTGGTTCAGTGGCTCAGGTGAGATTGCTTTTCCTACATCGTGGTGGGCCCGCTTCAGACGCTGCTCCTCACATTGTTACCGCCACCATTTGTAAACATGATTTCATGCTGTATCCTGGAAACTCATCTCCTTTTTCTAGCGAGGATTACCCGAACAATATAAAGAAATCAGGAATGCCTGTCAAACAAGAAACACAAGATAACGTGGAACTTTTATTTATTTTTCCTTTGAAATGA 1506 0.4356 MKELWRVSSLNQDLEVLDNDDVSASFPHVDGDYSVSLHGPTVDAPQIWRGMSRPVLIGAGRYTQEGCEMSVLRMELDIQRFLNNTDQQHFEFQHFPSSYLRLAAHRVAQHYGMQTMIQDYSVDGQGSKIVVRKLAESRYPAVRLSEIPAKQPENDKPEQIKIVIRPRPNKSNANEINEAGLKGNPMRSVEERKEDYDRARARIFSGSSDASDALSLVPVDGTNCSLGKDENEAGKNPMVDSEKCTSIRDTGSNRVAILRDREKDRSDPDYDRSYGRYARSIPNVNLVPFGLHKVPPSFAQYDSNFNQLGQMSQTQPSLGYGPPSSPIMSPFTGLNQMSGDVTYLQWPSTAMMYAHSYDQFRHAVFQVFIDTNYFLPKRCWGGKMLDVVQKDRCLDDVILLSKFPNMMVKAQSNYLRSSCCLSGIGSVAQVRLLFLHRGGPASDAAPHIVTATICKHDFMLYPGNSSPFSSEDYPNNIKKSGMPVKQETQDNVELLFIFPLK 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0631 501 Pfam R3H domain 71 132 IPR001374 GO:0003676
Lele06g0631 501 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 67 353 - -
Lele06g0631 501 Pfam SUZ domain 159 207 IPR024771 -
Lele06g0631 501 SMART R3H_4 50 134 IPR001374 GO:0003676
Lele06g0631 501 Gene3D - 54 167 IPR036867 GO:0003676
Lele06g0631 501 SUPERFAMILY R3H domain 69 169 IPR036867 GO:0003676
Lele06g0631 501 ProSiteProfiles R3H domain profile. 68 135 IPR001374 GO:0003676
Lele06g0631 501 ProSiteProfiles SUZ domain profile. 138 208 IPR024771 -
Lele06g0631 501 CDD R3H_encore_like 71 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0631 Lele-ChrLele06 3758187 3766256 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0631 06 3758187 3766256 Lele06g0631 06 3758187 3766256 ECH
Lele06g0631 06 3758187 3766256 Lele07g0825 07 4739156 4742458 hybridization
Lele06g0631 06 3758187 3766256 Lele08g0629 08 3801833 3805143 hybridization