Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0557 ATGGGTATCAAAATTTTCATGGTTTCTTTCATGCTAACCTCAATATTGTTCTTCATTCTTTATACGCCCACCAGATTAACCATGCGCATCTCCAGCTTCAGACCTGTGATGAAATATTTCAATGTCTCAAAAACCAGCAAAGCATATCCAGTTTCTTTTGCTTACCTGATCTCTGCATCCAAAGGAGACGCCGTAAAGCTCAAGAGGTTGGTGAAGGCACTGTACCATCCGGGGAATTACTACCTGATTCATATGGATTATGGGGCACCCGAATCAGAACTTAGGGATGTTGCTGAGTTTGTGGCCACAGACCCTGTTTTTGTTGATGTCGGAAATGTTTGGGTTGTGGGGAAGCGTAATTTGGTCACTTATAGAGGACCAACCATGCTTGCTACCACTCTCCATGCTATGTCTATGCTTCTGAGGACTTGCCAATGGGACTGGTTTATTAATCTTAGTGCCTCTGATTATCCCTTAGTTACACAAGATGATCTGATCCAAGCATTTTCTGAGTTGCCAAGAAGTATCAATTTCGTTCAGCATAGCAGTCGTCTGGGTTGGAAACTGAATAAGAGAGGCAAGCCAATAATTATAGACCCAGGGCTTTACAATCGCAATAAATCAGAGATTTGGTGGGTCATTAAGCAAAGAAGTTTGCCTACATCTTTCAAACTCTATACAGGTTCAGCATGGACCATATTATCAAGATCATTTGCGGAGTATTGCATTGTGGGGTGGGAAAATCTGCCAAGAAACATGCTTCTGTACTACACTAATTTTGTGTCATCACCTGAAGGGTATTTCCAGACAGTAATATGCAATTCTGAAGAGTACAAGAACACCACAGCTAACCATGATCTTCACTACATTTCTTGGGATGTGCCTCCAAAGCAACACCCCAGGTCTCTTGGTCTCAAAGATTATCGCAAAATGGTTATGAGCAGCCGGCCATTCGCCAGAAAGTTCAAGAAAAACGACGCTGTTCTTGATAAAATCGATAGAGATCTTCTCAAGAGGCGTCGTGGGCAATTTTCTTTTGGAGGATGGTGTTCCAGTGGTGGCAAAAGCAGAGGATGCTCTGATTTTAAAATTGAGAATTTTGGTGTTCTCAGCCCTGGCCCTGCCCATAGGAGGTTGAGAAATTTGCTGTCCAAGCTTCTCTCTGATAGATTTTTCTACAAACTGCAATGCAGATAG 1197 0.4252 MGIKIFMVSFMLTSILFFILYTPTRLTMRISSFRPVMKYFNVSKTSKAYPVSFAYLISASKGDAVKLKRLVKALYHPGNYYLIHMDYGAPESELRDVAEFVATDPVFVDVGNVWVVGKRNLVTYRGPTMLATTLHAMSMLLRTCQWDWFINLSASDYPLVTQDDLIQAFSELPRSINFVQHSSRLGWKLNKRGKPIIIDPGLYNRNKSEIWWVIKQRSLPTSFKLYTGSAWTILSRSFAEYCIVGWENLPRNMLLYYTNFVSSPEGYFQTVICNSEEYKNTTANHDLHYISWDVPPKQHPRSLGLKDYRKMVMSSRPFARKFKKNDAVLDKIDRDLLKRRRGQFSFGGWCSSGGKSRGCSDFKIENFGVLSPGPAHRRLRNLLSKLLSDRFFYKLQCR 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0557 398 Pfam Core-2/I-Branching enzyme 53 311 IPR003406 GO:0016020|GO:0016757
Lele08g0557 398 PANTHER GLYCOSYLTRANSFERASE 8 397 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0557 Lele-ChrLele08 3365618 3368184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0557 42 398 Glycosyltransferase AT4G27480 55.372 9.20e-150 429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0716 05 4221416 4223981 Lele08g0557 08 3365618 3368184 hybridization
Lele06g0552 06 3309524 3313717 Lele08g0557 08 3365618 3368184 hybridization