Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0716 ATGGGTATCAAATTTTTCATGGTTTCTTTTATACTAACTTCAATACTGTTATTCATTCTTTATATGCCCACCAGATTAACCATGCCCATCTCCAGCTTCAAGCCTGTGATGAAATATTTCAATGTCTCAAAAACCAGCAAAGCATACCCAGTTTCTTTCGCTTACCTGATCTCTGCATCCAAAGGAGACGCCGTGAAGATCAAGAGGTTGGTGAAGGCGCTGTACCATCCGGGGAATTTCTATCTGATTCATATGGATTATGGGGCACCCGAATCAGAACTTAGGGATGTCGCTGAGTTTGTGGCCGCAGACCCTGTTTTTGTTGATGTGGGGAATGTTTGGGTTGTGGGGAAGCGTAATTTGGTCACTTATAGAGGACCAACCATGCTTGCTACCACACTTCATGCTATGTCTATGCTTCTGAGGACCTGCCAATGGGACTGGTTCATTAATCTTAGTGCCTCTGATTATCCCTTAGTTACACAAGATGGTATGGTGAGTGGCCTTTATCTTTTATACCCGTTGCATAATCTGAGTAAATTTACTAATCTGATCCAAGCATTTTCTGAGTTGCCAAGAAGTATCAACTTCGTTCAGCATAGTAGTCGTCTGGGTTGGAAACTGAATAAGAGAGGCAAGCCAATAATTATAGACCCGGGGCTTTACAATCGGAATAAATCAGAGATTTGGTGGGTCATTAAGCAAAGAAGTTTGCCGACATCTTTCAAACTTTATACAGGTTCAGCATGGACCATATTGTCAAGATCATTCGCGGAGTATTGCATTGTGGGGTGGGAAAATCTGCCAAGGACCATGCTTCTGTACTACACTAATTTTGTGTCATCACCTGAAGGGTATTTCCAGACAGTAATATGCAATTCTGAAGAGTACAAGAACACCACAGCTAACCATGACCTTCACTACATCACTTGGGATGTGCCTCCAAAGCAACACCCCAGGTCTCTTGGTCTCAAAGATTATCGCAAAATGGTTCTGAGCAGTCGGCCGTTCGCCAGAAAATTCAAGAAAAACGATGCCGTTCTTGATAAAATCGATAGAGATCTTCTCAAGAGCCATCGTGGCCAATTTTCTTATGGAGGATGGTGTTCCAGTGGTGGGAGAAACAGAGGATGCTCTGATTTTAGGATCGAGAAGTTTGGTGTTCTCAGCCCTGGCCCTGGTCATAGGAGGTTGAGAAATTTGCTGTCCAAGCTTCTCTCTGATAGATTTTTCTACAAACTGCAATGCAGATAA 1254 0.4298 MGIKFFMVSFILTSILLFILYMPTRLTMPISSFKPVMKYFNVSKTSKAYPVSFAYLISASKGDAVKIKRLVKALYHPGNFYLIHMDYGAPESELRDVAEFVAADPVFVDVGNVWVVGKRNLVTYRGPTMLATTLHAMSMLLRTCQWDWFINLSASDYPLVTQDGMVSGLYLLYPLHNLSKFTNLIQAFSELPRSINFVQHSSRLGWKLNKRGKPIIIDPGLYNRNKSEIWWVIKQRSLPTSFKLYTGSAWTILSRSFAEYCIVGWENLPRTMLLYYTNFVSSPEGYFQTVICNSEEYKNTTANHDLHYITWDVPPKQHPRSLGLKDYRKMVLSSRPFARKFKKNDAVLDKIDRDLLKSHRGQFSYGGWCSSGGRNRGCSDFRIEKFGVLSPGPGHRRLRNLLSKLLSDRFFYKLQCR 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0716 417 Pfam Core-2/I-Branching enzyme 53 167 IPR003406 GO:0016020|GO:0016757
Lele05g0716 417 Pfam Core-2/I-Branching enzyme 179 330 IPR003406 GO:0016020|GO:0016757
Lele05g0716 417 PANTHER GLYCOSYLTRANSFERASE 8 416 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0716 Lele-ChrLele05 4221416 4223981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0716 42 417 Glycosyltransferase AT4G27480 52.094 1.37e-143 414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0716 05 4221416 4223981 Lele07g0758 07 4292822 4295376 hybridization
Lele05g0716 05 4221416 4223981 Lele08g0557 08 3365618 3368184 hybridization