Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0552 ATGCCCACCAGATTAACCATGCGCATCTCCAGCTTCAGACCTGTGATGAAATATTTCAATGTCTCAAAAACCAGCAAAGCATATCCAGTTTCTTTTGCTTACCTGATCTCTGCATCCAAAGGAGACGCCGTAAAGCTCAAGAGGTTGGTGAAGGCGCTATGGTATGATCTGATCCAAGCATTTTCTGAGTTGCCAAGAAGTATCAATTTCGTTCAGCATAGCAGCCGTCTGGGTTGGAAACTGAATAAGAGAGGCAAGCCAATAATTATAGACCCAGGGCTTTACGATCGCAATAAATCAGAGATTTGGTGGGTCATTAAGCAAAGAAGTTTGCCTACATCTTTCAAACTTTATACAGAGCAGCATGGCAGAGGTGGTGGATCTAGGATCAAGAGTATGTTCATCCAGGAGATGCACGTGCACCATGTCTTGTTTCTTGCGATGTCTTCTTTCTATGGAACTTGGACTAACTCACATTCATCATCTTACCCCTGTTCAGCATGGACCATTTTATCAAGATCGTTTGCTGAGTATTGCATTGTGGGGTGGGAAAATCTGCCAAGAAACATGCTTCTGTACTACACTAATTTTGTGTCATCACCTGAAGGGTATTTCCAGACAGTAATATGCAATTCTGAAGAGTACAAGAACACCACAGCTAACCATGATCTTCACTACATCACTTGGGATGTGCCTCCAAAGCAAAACCCCAGGTCTCTTGGTCTCAAAGATTATCGCAAAATGGTTCTGAGCAGCCGGCCATACGCCAGAAAGTTCAAGAAAAACGATGCCGTTCTTGATAAAGTCGATAGAGATCTTCTCAAGAGGCTTCGTGGGCAATTTTCTTTTGGAGGATGGTGTTCCAGTGGTGGCAAAATCAGAGGATGCTCTGATTTTAAAATTGAGAATTTTGGTGTTCTCAGCCCTGGCCCTGGCCATAGGAGGTTTCCATTTTTGCTCAATGTCGATGGCCATTTGGGGATTCATCATGCAAAAGGGTGCTCTTTCCGAGACGAAAGGACAGAGCAGGTCGGACGGCCAAGGGAAGCAGAGATAAGACGACCAGAGACGACTGAAGAAGCAGAGGGAGATGGACTGCATCTTAGATGA 1110 0.4459 MPTRLTMRISSFRPVMKYFNVSKTSKAYPVSFAYLISASKGDAVKLKRLVKALWYDLIQAFSELPRSINFVQHSSRLGWKLNKRGKPIIIDPGLYDRNKSEIWWVIKQRSLPTSFKLYTEQHGRGGGSRIKSMFIQEMHVHHVLFLAMSSFYGTWTNSHSSSYPCSAWTILSRSFAEYCIVGWENLPRNMLLYYTNFVSSPEGYFQTVICNSEEYKNTTANHDLHYITWDVPPKQNPRSLGLKDYRKMVLSSRPYARKFKKNDAVLDKVDRDLLKRLRGQFSFGGWCSSGGKIRGCSDFKIENFGVLSPGPGHRRFPFLLNVDGHLGIHHAKGCSFRDERTEQVGRPREAEIRRPETTEEAEGDGLHLR 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0552 369 Pfam Core-2/I-Branching enzyme 55 248 IPR003406 GO:0016020|GO:0016757
Lele06g0552 369 MobiDBLite consensus disorder prediction 337 369 - -
Lele06g0552 369 PANTHER GLYCOSYLTRANSFERASE 56 317 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0552 Lele-ChrLele06 3309524 3313717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0552 56 321 Glycosyltransferase AT4G27480 45.489 2.07e-79 248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0552 06 3309524 3313717 Lele07g0758 07 4292822 4295376 hybridization
Lele06g0552 06 3309524 3313717 Lele08g0557 08 3365618 3368184 hybridization