Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0551 ATGGGTGTGTCGATTGATTCTTCGGAGGGAGGGAGTCGTGGAGGACAGGGTTCTTGGTGTTCATTGAGGTTTTTTACTAGGAGGAAGCTGGTGGATTCTGCCCACAAAAAGACTGAGAGTCAGCTTTCCAAGGAGTTATCTGTTCTCCATCTGATAGGAATTGGTGTTGGTTCGACAATTGGTGCTGGAGCCTACGTCCTTGTTGGAACAGTCGCACGAGAACATTCTGGACCCGCCTTGGCCTTTTCTTTTCTCATAGCCGGACTAGCGGCTGCTCTTTCAGCTTTTTGCTACGCAGAGTTGGCTAGTCGTTGCCCTTCTGCTGGAAGTGCATATCACTATTCATATATATGTGTAGGAGAAGGTGCTGCATGGTTGATTGGATGGGCCTTGATACTGGAATATACAATTGGTGGAGCAGCTGTTGCTCGTGGCATATCTCCTAACATGGCTGCATTTTTTGGAGGTATGGATCATTTGCCCTTCTTCTTAGCCCGTCAGCATATTCCTGGTACTGATATTGTCGTGGACCCATGTGCTGCAATTGTGGTACTTATTATTACTGGACTCCTGTGTGGTGGCATTAAGGAGAGTACAACGGTACAAGGCATAGTCACATCAGTGAATGTGTGTGCCTTGATTTTTGTCATAGTAGCTGGTGGTTACTTGGGATGCAAGTCTGGATGGGTTGGATATGAGCTTCCTTCAGGTTATTTCCCCTTTGGGGTTGATGGAATGCTTGCTGGTTCTGCAACAGTCTTCTTCGCATACATAGGTTTTGATGCTGTTGCCAGCACTGCAGAAGAGGTGAAAAATCCTCAACGAGATTTGCCACTGGGTATTGGGGTTGCACTGTTTCTTTGTTGTGCATTATATATGATGGTCTCCATCGTTGTTGTTGGCTTAGTACCTTATTATGCAATCAATCCTGACACCCCCATATCCTCTGCATTTGCCAACCATGGGATGCAATGGGCAGCTTACATAATAAATGCTGGAGCTTTTACAGCTCTCTGTGCATCGTTGATGGGAGGTATACTTCCCCAGCCCCGAATTCTGATGGCTATGGCAAGGGATGGGCTGCTGCCACCATTTTTTTCAGACATTAATAAGTTCAGCCAGGTTCCTGTTAAGAGCACAATAGCTACTGGGCTTGTAGCTGCGATCTTGGCATCTTTAATGGATGTCTCTCAACTGGCTGGGATGGTTAGTGTGGGTACGCTTCTTGCATTCACCATGGTTGCAATATCTATATTAATATTAAGATACATTCCTCCGGATGAGGTCCCATTACCGCCTTCTCTCGAGGAATCAAATGATTCAGTTCCCTCAAAAAACCGTTGGATTAGTTATCACAGATATGGTAAACATGGAGAGGCAAATATTGGTGCTTCTGAGGGCATCAAACCTGTAGTTATCAAAGACGATATGCCAATCGATTGTCCTCATATTTCTCAACATTTTGCCGTAGGCAACTACATAGATGAAAGTACTAGGAGAAAAATCGTTGGGTGGATTATAGTACTCACATGCTTAGGGGTGTTCATCCTCACATATGCAGCTTCGGATTCAAGTCTTCTCAGATCTGTTCGTTTCACATTTTGTGGTGTGGGTGGCATTCTTGTTCTTTCTGGTCTCATCTTCCTAACCTGTATAGACCAAGATGATGCAAGACACAATTTTGGGTACTCTGGAGGTTTCATTTGCCCGTTGGTGCCACTGCTGCCTATAGCTTGCAGTCTCATCAATTGCTACTTGCTTATTAATCTTGGAACTGCCACGTGGACTCGAGCGTCAATATGGCTTGCCATAGGGGTACTTGTTTATTTTTTCTATGGCCGAACCCACAGTTCTCTAAGAGATGCAGTTTATGTTCCTGTATCACATATGGCTGAAACGTATGGTACCTCCACGAGCTGTCTAGCTTAA 1929 0.4505 MGVSIDSSEGGSRGGQGSWCSLRFFTRRKLVDSAHKKTESQLSKELSVLHLIGIGVGSTIGAGAYVLVGTVAREHSGPALAFSFLIAGLAAALSAFCYAELASRCPSAGSAYHYSYICVGEGAAWLIGWALILEYTIGGAAVARGISPNMAAFFGGMDHLPFFLARQHIPGTDIVVDPCAAIVVLIITGLLCGGIKESTTVQGIVTSVNVCALIFVIVAGGYLGCKSGWVGYELPSGYFPFGVDGMLAGSATVFFAYIGFDAVASTAEEVKNPQRDLPLGIGVALFLCCALYMMVSIVVVGLVPYYAINPDTPISSAFANHGMQWAAYIINAGAFTALCASLMGGILPQPRILMAMARDGLLPPFFSDINKFSQVPVKSTIATGLVAAILASLMDVSQLAGMVSVGTLLAFTMVAISILILRYIPPDEVPLPPSLEESNDSVPSKNRWISYHRYGKHGEANIGASEGIKPVVIKDDMPIDCPHISQHFAVGNYIDESTRRKIVGWIIVLTCLGVFILTYAASDSSLLRSVRFTFCGVGGILVLSGLIFLTCIDQDDARHNFGYSGGFICPLVPLLPIACSLINCYLLINLGTATWTRASIWLAIGVLVYFFYGRTHSSLRDAVYVPVSHMAETYGTSTSCLA 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0551 642 Gene3D Amino acid/polyamine transporter I 41 436 - -
Lele08g0551 642 FunFam probable cationic amino acid transporter 42 434 - -
Lele08g0551 642 PIRSF AA_transporter 27 431 - -
Lele08g0551 642 PIRSF AA_transporter 488 623 - -
Lele08g0551 642 Pfam C-terminus of AA_permease 567 617 IPR029485 -
Lele08g0551 642 Pfam Amino acid permease 46 428 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lele08g0551 642 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 27 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0551 Lele-ChrLele08 3338175 3343750 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0551 22 642 Organic Solute Cotransporters AT5G36940 65.873 0.0 798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0551 08 3338175 3343750 Lele08g0551 08 3338175 3343750 ECH
Lele05g0713 05 4205417 4211064 Lele08g0551 08 3338175 3343750 hybridization
Lele06g0548 06 3284341 3285513 Lele08g0551 08 3338175 3343750 hybridization