Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0548 ATGTTACCCCAAACCTTAACATTACTCTTTGCGGTGATAGCATCCATCCACAGGCGGAAACGTGCTGCATGGAGCATAGCCTTTCTTTGTATAGGGACTTTTATCTTTGCAATTGCAGCTTCAGCCGAAGGGTGTCCCAGTATTGTGCGCTTTACATTTTGCGGTCTGGGAGGATTAATTCTTGTCTGTAGTACAATTGCCCTTGCCTACATAGGCCAAGATGACGCGAGGCACAGTTTTGGATACAGAGGAGGGTTTCTTTGCCCGTGTGTTCCATTCCTTCCTGCTATCTGCATTCTCATAAACACCTACCTATTAGTTGATCTTGGGCTTTCCACATGGATTCGAGTTTCACTGTGGTTGGCCATTGGAGCAGCCGTTTATATATGCTATGGCCGTAAACACAGCTCACTGTTAAATGCCGTCTATGTTCGGTCAGAACATGCCGACGAGATTCAGCGTGCTCAGGCAAATCCCGGGGCCTCGTAG 489 0.4765 MLPQTLTLLFAVIASIHRRKRAAWSIAFLCIGTFIFAIAASAEGCPSIVRFTFCGLGGLILVCSTIALAYIGQDDARHSFGYRGGFLCPCVPFLPAICILINTYLLVDLGLSTWIRVSLWLAIGAAVYICYGRKHSSLLNAVYVRSEHADEIQRAQANPGAS 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0548 162 Pfam C-terminus of AA_permease 86 136 IPR029485 -
Lele06g0548 162 Gene3D Amino acid/polyamine transporter I 6 152 - -
Lele06g0548 162 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 22 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0548 Lele-ChrLele06 3284341 3285513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0548 12 158 Organic Solute Cotransporters AT5G36940 55.782 3.91e-53 176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0548 06 3284341 3285513 Lele06g0548 06 3284341 3285513 ECH
Lele06g0548 06 3284341 3285513 Lele07g0754 07 4276712 4282398 hybridization
Lele06g0548 06 3284341 3285513 Lele08g0551 08 3338175 3343750 hybridization