Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0713 ATGGGTGTGTCGTTTGATTCTTCGGAGGGAGGGAGGCATGGAGGACAGGGTTCTCGGAATTCATTGAGTTTTTTGACTAGGAGGAAGCTGGTGGATTCTGCCCACAAACAGACTGAGGGTCAGCTTGCCAAGGAGTTATCTGTTCTCCATCTGATCGGAATTGGTGTTGGTGCGACAATTGGCGCTGGAGTCTACGTCCTTGTTGGAACAGTCGCTCGAGAACATTCTGGACCCGCCTTGACCTTTTCTTTTCTCATAGCTGGACTAGCGGCTGCTCTTTCGGCTTTTTGCTACGCAGAGTTGGCTAGCCGTTGCCCTTCTGCTGGAAGTGCATATCACTATTCATATATATGTATAGGAGAAGGTGCTGCATGGTTGATTGGATGGGCCTTGATACTGGAATATACAATTGGTGGAGCAGCTGTTGCTCGTGGCATATCTCCTAACATGGCTGCATTTTTTGGAGGTATGGATCATTTGCCCTTCTTCTTAGCCCGTCAGCATATTCCTGGTACTGATATTGTTGTGGACCCATGTGCTGCCATCATGGTACTTATTATTACTGGACTCTTGTGCGGTGGCATCAAGGAGAGTACAACGGTACAAGGCATTGTCACATCAGTGAATGTGTGTGCCTTGATTTTTATCATAGTAGTTGGTTGTTACTTGGGATTCAAGTCTGGATGGATTGGAGATGAACTTCCTTCGGGTTATTTTCCCTTTGGGTTTGATGGAATGCTTGCTGGTTCTGCAACAGTCTTCTTCGCATATATAGGTTTTGATTCTATTGCCAGCACTGCTGAAGAGGTGAAAAATCCTCAACGAGATTTGCCACTGGGTATTGGGGCTGCACTGTTTATTTGTTGTGCTTTGTATATGATGGTCTCCATCGTTGTTGTTGGCTTAGTACCTTATTATGCAATCAATCCCGACACCCCCATATCCTCTGCATTTGCAAACCATGGGATGCAATGGGCAGCTTACGTAGTAAATGCTGGGGCTTTTACAGCTCTCTGTGCATCATTGATGGGTGGTATACTTCCCCAGCCCCGAATTTTGATGGCTATGGCAAGGGATGGACTGCTGCCACCATTTTTTTCAGACGTTAGCAAGTTCAGCCATGTTCCTGTTAAGAGCACAGTAGCTACTGGCCTTGTAGCTGCAATCTTGGCGTCTTTAATGGATGTCTCTCAACTGGCTGGGATGGTTAGTGTGGGTACGCTTCTTGCATTCACCATGGTTGCAATATCTATATTAATATTAAGATACATCCCTCCGGATGAGGTCCCATCACCACCTTCTCTCGAGGAATCGAATTATTCGTTTCCATCAAAAAACCGTTGGATTAATGATCACAGATATGGTAAACATGGAGAGGCAAATATTGGTGCTTCTAAGGACATCAAACCTGTGGTTATCAAAGAGGATGAGCCAATCAATTTTCCTCTTATTTCTCAACATTTTTCTATGGGCAACTACATAGATGAAAGTAGTAGGAGAAAAATCGTTGGGTGGATCATAGCACTCACATGCTTAGGGGTGTTCATCCTCACATATGCAGCTTCGGATTCAAGTCTTCTCAGATCTGTTCGTTTCACATTTTGTGGGGTGGGTGGCTTTCTTGTTCTTTCTGGTCTCATCTTCCTGACCTGTATAGACCAAGATGATGCAAGACACAATTTTGGGTACTCTGGAGGTTTCATTTGCCCGTTGGTGCCACTGCTGCCTATAACTTGCATTCTCATCAATTGCTACTTGCTTATTAATCTTGGAGCTGCCACGTGGGCTCGTGTATCAATATGGCTTGCCATAGGGGTACTTGTTTATATTTTCTATGGCCGAACCCACAGTTCTCTTCGAGATGCAGTTTATGTTCCTGTATCTCATATGGATGAGACGTATCATACCTCCACGAGCTGCCTAGCTTAA 1929 0.45 MGVSFDSSEGGRHGGQGSRNSLSFLTRRKLVDSAHKQTEGQLAKELSVLHLIGIGVGATIGAGVYVLVGTVAREHSGPALTFSFLIAGLAAALSAFCYAELASRCPSAGSAYHYSYICIGEGAAWLIGWALILEYTIGGAAVARGISPNMAAFFGGMDHLPFFLARQHIPGTDIVVDPCAAIMVLIITGLLCGGIKESTTVQGIVTSVNVCALIFIIVVGCYLGFKSGWIGDELPSGYFPFGFDGMLAGSATVFFAYIGFDSIASTAEEVKNPQRDLPLGIGAALFICCALYMMVSIVVVGLVPYYAINPDTPISSAFANHGMQWAAYVVNAGAFTALCASLMGGILPQPRILMAMARDGLLPPFFSDVSKFSHVPVKSTVATGLVAAILASLMDVSQLAGMVSVGTLLAFTMVAISILILRYIPPDEVPSPPSLEESNYSFPSKNRWINDHRYGKHGEANIGASKDIKPVVIKEDEPINFPLISQHFSMGNYIDESSRRKIVGWIIALTCLGVFILTYAASDSSLLRSVRFTFCGVGGFLVLSGLIFLTCIDQDDARHNFGYSGGFICPLVPLLPITCILINCYLLINLGAATWARVSIWLAIGVLVYIFYGRTHSSLRDAVYVPVSHMDETYHTSTSCLA 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0713 642 Pfam C-terminus of AA_permease 567 617 IPR029485 -
Lele05g0713 642 FunFam probable cationic amino acid transporter 42 434 - -
Lele05g0713 642 Pfam Amino acid permease 46 428 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lele05g0713 642 Gene3D Amino acid/polyamine transporter I 42 442 - -
Lele05g0713 642 MobiDBLite consensus disorder prediction 1 20 - -
Lele05g0713 642 PIRSF AA_transporter 488 623 - -
Lele05g0713 642 PIRSF AA_transporter 24 433 - -
Lele05g0713 642 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 26 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0713 Lele-ChrLele05 4205417 4211064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0713 22 642 Organic Solute Cotransporters AT5G36940 64.547 0.0 790
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0713 05 4205417 4211064 Lele05g0713 05 4205417 4211064 ECH
Lele05g0713 05 4205417 4211064 Lele07g0754 07 4276712 4282398 hybridization
Lele05g0713 05 4205417 4211064 Lele08g0551 08 3338175 3343750 hybridization