Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0550 ATGATAGATAACCGGCAAAGCACTGATGTTAATGGTGGAGTTGGAGAAGGAGGATGGTTACGGGAACTTAGAAGTTGGGTAAGGAGAAAGCAGGTTGATTCTGCGCTTTCAAAGCGAGAAGGTCCACGATTGGCCAGAAAATTAACTGCCGTCGAACTCGTTGGACTTGGGGTTGGAGCAACCATAGGAGCTGGAGTGTATATTCTTGTTGGAACAGTTGCTAGACAACATGCTGGACCGGCACTTACAATATCAATTTTCACTGCGGGAATAGCTGCTGCACTTTCAGCTCTTTGTTATGCTGAGTTAGCTTGTCGATGCCCATCTGCTGGGAGTGCTTACCACTATACATACATATGCATTGGAGAAGGGGTTGCCTGGTTTGTTGGCTGGGCCCTGATTCTGGAGTACACAATTGGTGGTTCAGCTGTTGCTCGTGGCATAACTCCAAATATGGCCTTGTTTTTTGGGGGTGAGGATAATCTGCCTTTTATTTTGGCTCGTCATACCATCCCAGGTTTTGGAATTGTGGTTGACCCCTGTGCAGCTGTATTAATTCTTCTTGTTACCCTACTGTTGTGCACTGGAATCAAAGAGAGTTCAACTGCACAATTCATAGTGACAACAATAAATGTATGCGTTCTGCTCTTCATCATCATAGCAGGTGGTTATCTTGGTTTCAAGAATGGATGGGATGGTTATGAGCTCCCCAATGGGTATTTCCCGTTTGGATTAAATGGTGTGTTCTCTGGGGCCGCAATTGTTTTCTTTTCTTACATTGGTTTTGATTCAGTGACCAGCACAGCTGAGGAGGTGAAAAATCCTCAACGAGATTTGCCCCTGGGTATAGCAATTGCATTATCCATATGTTGCATTGTAAGGTACATAATAACTACTGGAGCAGTCACTGCTCTCTTTGCCAGTTTGTTAGGTTCAATTCTTCCCCAGCCACGGATCTTTATGGCAATGGCTAGAGATGGATTACTGCCTTCTTTCTTCTCAGAAATCAATAGGGGAACCCAGGTCCCCGTAAAGAGTACTATTGTCACTGGTCTCTTGGCAGCTGCTCTAGCTTTCTTTATGGATGTTTCTCAGTTAGCAGGGATGGTTAGCATTGGAACACTGCTTGCATTCACCACTGTTGCAGTTTCAGTTTTGATTCTCAGATATGTTCCACCTGATGAGGTGCCCATTCCATCTTCACTTCAAAAATCCATTGATCCAATTCCTCCTAGTCCATCGTCTCTTGATACATCCATTGACCCAATGCCTTTGCATTTGAGTGGTGATGTTGAGGAAATTGCTGGCGCAAGTCCTGTAGATGCTGTCGATTCTCACGAGGATAGCCATCAACAATCACATAATGAGGCAGCTGCCTTGCTTGGACATCCTTTAATCGTGAAACAAGGAACACAAGCATCCATCCATAGGCGGAAACGTGCTGCATGGAGCATAGCCTTTCTTTGTATAGGGACTTTTATCTTTGCAATTGCGGCTTCAGCCGAAGGTTGTCCCAGTATTGTGCGCTTTACATTTTGCGGCCTGGGAGGACTAATTCTTGTCTGTAGTACAATTGTCCTTGCCTACATAGGCCAAGATGACGCGAGGCACAGTTTTGGATACAGAGGAGGGTTTCTTTGCCCGTGTGTTCCATTCCTTCCTGCTATCTGCATTCTCATAAACACCTACCTATTAGTTGATCTTGGGCTTTCCACATGGATTCGAGTTTCACTGTGGTTGGCCATTGGAGCAGTCGTTTATATATGCTATGGCCGCAAACACAGCTCACTGTTAAATGCCGTCTATGTTCCGTCAGCACATGCCGACGAGATTCAGCGTGCTCAGGCAAATCATGGGGACTAG 1863 0.4546 MIDNRQSTDVNGGVGEGGWLRELRSWVRRKQVDSALSKREGPRLARKLTAVELVGLGVGATIGAGVYILVGTVARQHAGPALTISIFTAGIAAALSALCYAELACRCPSAGSAYHYTYICIGEGVAWFVGWALILEYTIGGSAVARGITPNMALFFGGEDNLPFILARHTIPGFGIVVDPCAAVLILLVTLLLCTGIKESSTAQFIVTTINVCVLLFIIIAGGYLGFKNGWDGYELPNGYFPFGLNGVFSGAAIVFFSYIGFDSVTSTAEEVKNPQRDLPLGIAIALSICCIVRYIITTGAVTALFASLLGSILPQPRIFMAMARDGLLPSFFSEINRGTQVPVKSTIVTGLLAAALAFFMDVSQLAGMVSIGTLLAFTTVAVSVLILRYVPPDEVPIPSSLQKSIDPIPPSPSSLDTSIDPMPLHLSGDVEEIAGASPVDAVDSHEDSHQQSHNEAAALLGHPLIVKQGTQASIHRRKRAAWSIAFLCIGTFIFAIAASAEGCPSIVRFTFCGLGGLILVCSTIVLAYIGQDDARHSFGYRGGFLCPCVPFLPAICILINTYLLVDLGLSTWIRVSLWLAIGAVVYICYGRKHSSLLNAVYVPSAHADEIQRAQANHGD 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0550 620 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 30 293 - -
Lele08g0550 620 PIRSF AA_transporter 291 398 - -
Lele08g0550 620 PIRSF AA_transporter 27 294 - -
Lele08g0550 620 PIRSF AA_transporter 472 602 - -
Lele08g0550 620 Pfam C-terminus of AA_permease 545 595 IPR029485 -
Lele08g0550 620 Pfam Amino acid permease 52 298 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lele08g0550 620 Gene3D Amino acid/polyamine transporter I 294 410 - -
Lele08g0550 620 Gene3D Amino acid/polyamine transporter I 44 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0550 Lele-ChrLele08 3329892 3335183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0550 23 605 Organic Solute Cotransporters AT3G03720 61.452 0.0 719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0550 08 3329892 3335183 Lele08g0550 08 3329892 3335183 ECH
Lele05g0711 05 4186785 4194880 Lele08g0550 08 3329892 3335183 hybridization
Lele06g0547 06 3275263 3279260 Lele08g0550 08 3329892 3335183 hybridization