Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0547 ATGATAGATGACCGGCAAAGCATTGATGGTGATGGTGGAGTTGGAGAAGGAAGATGGTTACGGGAACTTAGAAGTTTGGTAAGGAGAAAACAGGTTGATTCTGCGCTTTCAAAGCGAGAAGGCCCACGATTGGCCAGGAAATTAACTGCCGTCGAACTCGTTGGAATTGGGGTTGGAGCAACCATAGGAGCTGGAGTGTATATTCTTGTTGGAACAGTTGCTAGACAACATGCAGGACCGGCACTTACAATATCAATTTTCATTGCTGGAATAGCTGCTGCACTTTCAGCTCTTTGTTATGCTGAGCTAGCTTGTCGATGCCCATCTGCTGGGAGTGCTTACCACTATACATACATATGCATTGGAGAAGGGGTTGCTTGGTTTGTTGGCTGGGCCCTGATTCTGGAGTATACAATTGGTGCTTCAGCTGTTGCTCGTGGCATAACTCCAAATATGGTTGTGATTGCCTTGTTTTTTGGGGGTGAAGATAATCTGCCTTTTATTTTGGCTCGTCATACCATCCCAGGTTTTGGAATTGTGGTTGACCCCTGTGCAGCTGTATTAATTCTTCTTGTTACCCTACTGTTGTGCACTGGAATCAAAGAGAGTTCAACTGCACAATTCATAGTGACAACAATAAATGTATGCGTTCTGCTCTTCATCATCATAGCAGGTGGTTATCTTGGTTTCAAGAATGGATGGGATGGATATGAGCTCCCCAATGGGTATTTCCCGTTTGGATTAAACGGTGTGTTCTCTGGGGCCGCAATTGTTTTCTTTTCATACATTGGTTTTGATTCAGTGACCAGCACTGCTGAGGAGGTGAAAAATCCTCAACGAGATTTGCCCCTGGGTATAGCAATTGCATTATCCATATGTTGCATGTTGTATATGCTTGTATCAGCTGTTATTGTTGGCTTGGTGCCATACTATGATTTGGATCCTGATACGCCTATTTCCTCGGTATTTTCTAAACATGGAATGGAATGGGCAGTGTACATAATAACTACTGGAGCAGTCACTGCTCTCTTTGCCAGTTTGTTAGGTTCAATTCTTCCCCAGCCACGGATCTTTATGGCAATGGCTAGAGATGGATTACTTCCTTCTTTCTTCTCAGAAATCAATAGGGGAACCCAGGTCCCCGTAAAGAGTACTATTGTCACTGGTCTCTTGGCAGCTGCTCTAGCTTTCTTTATGGATGTTTCTCAGTTAGCAGGGATGGTTAGCGTTGGAACACTGCTTGCATTCACCACTGTTGCAGTTTCAGTTTTGATTCTCAGATATGTTCCACCTGATGAGGTGCCCATTCCATCTTCACTTCAAAAATCCATTGATCCAATTCCTCCTAGTCCATCGTCTCTTGATACATCCATTGACCCAATGCCTTTGCATTTGAGTGGTGATGTTGAGGAAATTGCTGGCGTAAGTCCTGTAGATGCTGGTGATTCTCACGAGGATAGCCATCAACAATCACATAATGAGGCAGCTGCCTTGCTTGGACATCCTTTAATCGTGAAACAAGGAACACAAGGTAATCATTGA 1542 0.4403 MIDDRQSIDGDGGVGEGRWLRELRSLVRRKQVDSALSKREGPRLARKLTAVELVGIGVGATIGAGVYILVGTVARQHAGPALTISIFIAGIAAALSALCYAELACRCPSAGSAYHYTYICIGEGVAWFVGWALILEYTIGASAVARGITPNMVVIALFFGGEDNLPFILARHTIPGFGIVVDPCAAVLILLVTLLLCTGIKESSTAQFIVTTINVCVLLFIIIAGGYLGFKNGWDGYELPNGYFPFGLNGVFSGAAIVFFSYIGFDSVTSTAEEVKNPQRDLPLGIAIALSICCMLYMLVSAVIVGLVPYYDLDPDTPISSVFSKHGMEWAVYIITTGAVTALFASLLGSILPQPRIFMAMARDGLLPSFFSEINRGTQVPVKSTIVTGLLAAALAFFMDVSQLAGMVSVGTLLAFTTVAVSVLILRYVPPDEVPIPSSLQKSIDPIPPSPSSLDTSIDPMPLHLSGDVEEIAGVSPVDAGDSHEDSHQQSHNEAAALLGHPLIVKQGTQGNH 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0547 513 MobiDBLite consensus disorder prediction 439 460 - -
Lele06g0547 513 Gene3D Amino acid/polyamine transporter I 44 448 - -
Lele06g0547 513 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 26 448 - -
Lele06g0547 513 Pfam Amino acid permease 52 433 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lele06g0547 513 FunFam probable cationic amino acid transporter 44 440 - -
Lele06g0547 513 MobiDBLite consensus disorder prediction 443 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0547 Lele-ChrLele06 3275263 3279260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0547 23 445 Organic Solute Cotransporters AT3G03720 75.529 0.0 642
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0547 06 3275263 3279260 Lele06g0547 06 3275263 3279260 ECH
Lele06g0547 06 3275263 3279260 Lele07g0753 07 4268030 4268388 hybridization
Lele06g0547 06 3275263 3279260 Lele08g0550 08 3329892 3335183 hybridization