Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0468 ATGAGTCTTGCCGTTTTCTCGACTTTAGGCGCAAGGAGACTGAGAGAAGATACTAGTCTGGTCGAGTGTCTGGAGTTGCTTTACTCGAGGGATTGGCGTGAGCTTCTAATGGCGAACCAGTTATTTCTTTTGTTGTTCCTTTTTGGAGCAATCTTTTGTGGGCAATCCAAGTTCATAGTGTATAACACCTCGCAGAGCATAGTTCCCGATAAGCTAAACGTTCATCTGGTTCCTCACACCCACGACGACGTTGGTTGGTTGAAGACTGTTGATCAGTACTACGTTGGCTCTAATAATTCGATTCAGGGAGCTTGTGTTCAAAATGTATTAGACTCCTTAGTTCCTTCGCTGTTGGCTGACAAGAATCGGAAATTTGTCTACGTTGAGATAGCTTTTTTCCAGCGGTGGTGGAGGGAACAGAGTGAAGCTGTTAAGCACGTAGTCAAGCAACTTGTCAGTTCGGGTCAATTAGAGTTCATAAACGGCGGCATGTGTATGCATGATGAGGCAGCAACGCATTACATAGACATGATTGATCAGACAACAATGGGACATCGGTTCCTGAAAGAGGAGTTTGGCGTGACTCCTAGAATTGGTTGGCAAATTGATCCCTTTGGACATTCTGCTGTGCAGGCATACTTGCTAGGATCTGAAGTTGGCTTTGACTCACTTTTCTTTGGTCGAATAGATTATCAAGATAGAGCTAAGCGGAAAAATGAAAAGAGTCTCGAGGTTATCTGGCAGGGAAGTAAGAGCCTTGGCTCGTCTGCTCAGATCTTTGCTGGTGCATTCCCTGAGAATTATGAGCCACCTGCTGGATTTTACTTCGAAGTTAATGATGATTCACCAATTGTTCAAGATAACATTGATTTATTTGATTACAATGTCCAAGATCGAGTGAATGACTTTGTTGCTGCTGCTGTATCACAGGCAAACATAACTCGGACAGATCATATAATGTGGACTATGGGAACTGATTTTAAGTATCAATATGCGAACTCATGGTTCCGACAGTTGGACAAGCTTATTCACTATGTCAACAAGGACGGACGTGTCAATGCGCTCTACTCTACACCATCTATCTATACTGATGCAAAATATGCTTCAAAAGAGTCATGGCCATTCAAGACTGATGATTTCTTCCCCTATGCAGATCGAGTGAATGCTTACTGGACAGGATACTTTACCAGTAGGCCAGGCTTCAAATACTATGTCAGATTAATGAGCGGCTATTATTTGGCTGCAAAACAGCTAGAACTTTTTAAGGGAAGGATGAGTTCAGGGCCAAATACTGACTCATTGGCTGATGCTTTAGCGATTGCTCAACACCATGATGGTGTCTCTGGTACAGAAAAGCAGCATGTGGCCAATGATTATGCTAAACGATTATCAATTGGCTACAAAGAGGCAGAGCAATTGGTTGCATCATCACTTGCTTGCCTGGTTGAGTCTGTGTCATTTCCAGGATGTCAGAACCCAGTTACTAAGTTTCAACAGTGTCCGCTTATGAATGTAAGTTATTGTCCTCCATCAGAAGTTGATCTGATTCAAGGGAAAAATTTGGTTATTGTGGTTTACAACTCTCTTGGCTGGTGGAGGAATGAAGTGGTTCGAATTCCTGTCACTAATGAAGATGTTATAGTTTATGATTCGGAGGGTAAAGAAATAGTGTCACAAATTCTACCTCAGGCTGAGGTCTTTGCATCCTTAAGAAACTACCATGTCATGGCATATCTGGGAGAAACTCCAGCCAAGGCACCCAAGTATTGGCTTGCATTTACTGTATCTGTACCACCTCTTGGTTTTAGCACATACACAGTCTCAGCTGCCAAAAGGACAGTTGCAGGACCCATCAGATCATCTGTGTATACATATCAAAGCAGTGAAACATCAAAAATTGAAGTTGGTCAAGGGAATTTGAGGCTTACATTTTCTCCAAATCAAGAAAAAATGACCAACTATGTTAATACCAGGAACTTGGTTGAGGAACAGATTGAACAGAGGTATTTGTACTACTCAGGATATAATGGAACTGATGATGAAGTGCCACAGAATTCTGGTGCCTACATATTCCGTCCAAATAGCACATATCTCTTAAAGCATGAAAGACAGGTTCCATTGACTGTTATGCGTGGACCCTTGCTAGATGAAGTACATCAACAGATAAATCCATGGATATATCAGATTACCAGACTGCACAAGGAAAAAGAGCATGTTGAAGTAGAGTTTATTGTTGGCCCCATACCTATTGATGATGGAATTGGTAAAGAAGTCGTCACTAAGATTTCAACCTCAATGGAAACCAACAAAACATTCTACACAGATTCTAATGGGCGTGATTTTATCAAAAGGATACGTGATTACAGATCAGACTGGGACCTGGAAGTGAACCAACCTATTTCTGGAAACTATTATCCTATTAATCTTGGGATATATGTAAAAGATAATAAGACAGAATTTTCAGTTTTGGTGGATCGATCTGTAGGAGGATCCAGCTTAGCTGATGGAGAAATAGAGCTAATGGTTCACAGGAGATTGCTACTTGATGATTCAAGAGGTGTTGCAGAGGCTTTAAATGAAACAGTCTGTGTTGCTGATGATTGCAGAGGCCTAATAATCCAAGGAAAAGTATACTTTAGAATAGATCCCCTGGGCGAGGGTGCTAAGTGGCGTCGTACAGTTGGCCAGGAAATATATTCTCCGCTTCTCTTGGCCTTTTCTGAACAGGATGGAGATGACTGGGTAAATTCCCATATTCTTACATATTCAGGAATTGATTCTAATTACATATTACCGGACAACGTTGCAATTATAACCTGGCAGGAACTAGATGGTGGAAAGGTTCTCCTTCGGTTAGCACATCTATATGAGGTTGACGAAGACAAGGATCTCTCTGCAATTGCAAGCGTGGAGCTGAAAAAGATGTTCCCAAGGAAAAAGATCGAAGAGGTGAGAGAGATGACTTTATCTGCGAATCAAGAAAGGACAGAGATGGAGAAGAAAAGACTTAAGTGGAAAGTAGAAGGCTCTTCTGGTTCTGGGGACGAACGTGTTCTTAGGGGAGGGCCTGTTGATCCTAAAGAGCTATCTGTGGAGCTTGCCCCAATGGAAATCCGCACCTTTATCGTTTACTTTGAATCTGAATCTGACATAAAAAGCATTTGA 3165 0.418 MSLAVFSTLGARRLREDTSLVECLELLYSRDWRELLMANQLFLLLFLFGAIFCGQSKFIVYNTSQSIVPDKLNVHLVPHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSLVPSLLADKNRKFVYVEIAFFQRWWREQSEAVKHVVKQLVSSGQLEFINGGMCMHDEAATHYIDMIDQTTMGHRFLKEEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSLFFGRIDYQDRAKRKNEKSLEVIWQGSKSLGSSAQIFAGAFPENYEPPAGFYFEVNDDSPIVQDNIDLFDYNVQDRVNDFVAAAVSQANITRTDHIMWTMGTDFKYQYANSWFRQLDKLIHYVNKDGRVNALYSTPSIYTDAKYASKESWPFKTDDFFPYADRVNAYWTGYFTSRPGFKYYVRLMSGYYLAAKQLELFKGRMSSGPNTDSLADALAIAQHHDGVSGTEKQHVANDYAKRLSIGYKEAEQLVASSLACLVESVSFPGCQNPVTKFQQCPLMNVSYCPPSEVDLIQGKNLVIVVYNSLGWWRNEVVRIPVTNEDVIVYDSEGKEIVSQILPQAEVFASLRNYHVMAYLGETPAKAPKYWLAFTVSVPPLGFSTYTVSAAKRTVAGPIRSSVYTYQSSETSKIEVGQGNLRLTFSPNQEKMTNYVNTRNLVEEQIEQRYLYYSGYNGTDDEVPQNSGAYIFRPNSTYLLKHERQVPLTVMRGPLLDEVHQQINPWIYQITRLHKEKEHVEVEFIVGPIPIDDGIGKEVVTKISTSMETNKTFYTDSNGRDFIKRIRDYRSDWDLEVNQPISGNYYPINLGIYVKDNKTEFSVLVDRSVGGSSLADGEIELMVHRRLLLDDSRGVAEALNETVCVADDCRGLIIQGKVYFRIDPLGEGAKWRRTVGQEIYSPLLLAFSEQDGDDWVNSHILTYSGIDSNYILPDNVAIITWQELDGGKVLLRLAHLYEVDEDKDLSAIASVELKKMFPRKKIEEVREMTLSANQERTEMEKKRLKWKVEGSSGSGDERVLRGGPVDPKELSVELAPMEIRTFIVYFESESDIKSI 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0468 1054 Gene3D - 920 1050 - -
Lele08g0468 1054 SUPERFAMILY Families 57/38 glycoside transferase middle domain 388 482 IPR028995 -
Lele08g0468 1054 Gene3D Glycoside hydrolase family 38, central domain 432 487 IPR037094 GO:0004559|GO:0006013
Lele08g0468 1054 Gene3D - 635 900 - -
Lele08g0468 1054 Pfam Glycosyl hydrolases family 38 N-terminal domain 73 384 IPR000602 GO:0004559|GO:0006013
Lele08g0468 1054 Pfam Glycosyl hydrolases family 38 C-terminal domain 637 852 IPR011682 GO:0004559|GO:0006013
Lele08g0468 1054 FunFam Alpha-mannosidase 72 352 - -
Lele08g0468 1054 Gene3D Glycoside hydrolase family 38, central domain 353 431 IPR037094 GO:0004559|GO:0006013
Lele08g0468 1054 FunFam Alpha-mannosidase 509 634 - -
Lele08g0468 1054 Pfam Alpha mannosidase middle domain 389 481 IPR015341 GO:0004559|GO:0006013
Lele08g0468 1054 FunFam Alpha-mannosidase 920 1047 - -
Lele08g0468 1054 SUPERFAMILY Glycoside hydrolase/deacetylase 61 385 IPR011330 GO:0005975
Lele08g0468 1054 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 934 1042 IPR041147 -
Lele08g0468 1054 PANTHER ALPHA-MANNOSIDASE 43 1046 - -
Lele08g0468 1054 CDD GH38N_AMII_LAM_like 72 348 - -
Lele08g0468 1054 Gene3D - 509 634 IPR013780 -
Lele08g0468 1054 SUPERFAMILY Galactose mutarotase-like 491 1045 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lele08g0468 1054 Coils Coil 981 1001 - -
Lele08g0468 1054 FunFam Alpha-mannosidase 432 486 - -
Lele08g0468 1054 FunFam Alpha-mannosidase 351 431 - -
Lele08g0468 1054 Gene3D Glycoside hydrolase 38, N terminal domain 72 352 IPR027291 -
Lele08g0468 1054 FunFam Alpha-mannosidase 634 900 - -
Lele08g0468 1054 SMART Alpha_mann_mid_2 389 463 IPR015341 GO:0004559|GO:0006013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0468 Lele-ChrLele08 2856161 2870783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0468 37 957 Glycoside Hydrolase AT5G13980 70.054 0.0 1371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0635 05 3737856 3738919 Lele08g0468 08 2856161 2870783 hybridization
Lele06g0455 06 2781211 2792966 Lele08g0468 08 2856161 2870783 hybridization