Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0455 ATGGCGAATCAGTTATTTCTTTGGTTGTTCCTTTTTGGAGCAATCTTTTGTGTGCAATCCAAGTTCATAGTGTATAACACCTCGCAGAGCATAGTTCCCGATAAGCTAAACGTTCATCTGGTTCCTCACACCCACGACGACGTTGGTTGGTTGAAGACTGTTGATCAGTACTACGTTGGCTCTAATAATTCGATTCAGGGAGCTTGTGTTCAAAATGTATTAGACTCCTTAGTTCCTTCGCTGTTGGCCGACAAGAATCGGAAATTTATCTACGTTGAGATAGCTTTTTTCCAGCGGTGGTGGAGGGAACAGAGTGAAGCTGTTAAGCACGTAGTTAAGCAACTTGTCAGTTCGGGTCAACTAGAGTTCATAAACGGTGGCATGTGTATGCATGATGAGGCAGCAACACATTACATAGACATGATTGATCAGACAACAATGGGACATCGGTTCCTGAAAGAGGAGTTTGGCGTGACTCCTAGAATTGGTTGGCAAATTGATCCCTTTGGACATTCTGCTGTGCAGGCATACTTACTAGGATCTGAAGTTGGCTTTGACTCACTTTTCTTTGGTCGAATAGATTATCAAGATAGAGATAAGCGGAAAAATGAAAAGAGTCTCGAGGTTATCTGGCAGGGAAGTAAGAGCCTTGGCTCGTCTGCTCAGATCTTTGCTGGTGCATTCCCTGAGAATTATGAGCCACCTGCTGGATTTTACTTCGAAGTTAATGATGATTCACCAATTGTTCAAGATAACATTGATTTATTTGATTACAATGTCCAAGATCGAGTAAATGACTTTGTTGCTGCTGCTGTATCACAGGCAAACATAACTCGGACAAATCATATAATGTGGACTATGGGAACTGATTTTAAGTATCAATATGCGAACTCATGGTTCCGACAGTTGGACAAGCTTATTCACTATGTCAACAAGGATGGACGTGTCAATGCGCTCTACTCTACACCATCTATCTATACTGATGCAAAATATGCTTCAAAAGAATCATGGCCATTCAAGACTGATGATTTCTTCCCCTATGCAGATCGAGTGAATGCTTACTGGACAGGATACTTTACCAGTAGGCCAGCCTTCAAATACTATGTCAGATTAATGAGCGGCTATTATTTGGCTGCAAAACAGCTAGAACTTTTTAAGGGAAGGATGAGTTCAGGGTCAAATACTGACTCATTGGCTGATGCTTTAGCGATTGCTCAACACCATGATGGTGTCTCTGGTACAGAAAAGCAGCATGTGGCCAATGATTATGCTAAACGATTATCAATTGGCTACAAAGAGGCAGAGCAATTGGTTGCATCATCACTTGCTTGCCTTGTTGAGTCTGTGTCATTTCCAGGATGTCAGAACCCAGTTACTAAGTTTCAACAGTGTCCGCTTATGAATATAAGTTATTGTCCTCCATCAGAAGTTGATCTGATTCAAGGGAAAAATTTGGTTATTGTGGTTTACAACTCTCTTGGCTGGTGGAGGAATGAAGTGGTTCGAATTCCTGTCACTAATGAAGATGTTATAGTTTATGATTCGGAGGGTAAAGAAATAGTGTCGCAACTTCTACCTCAGGCTGAGGTCTATGCATCCTTAAGAAACTACCATGTCATGGCATATCTGGGAGAAACTCCAGCCAAGGCACCCAAGTATTGGCTTGCATTTACTGTATCTGTACCACCTCTTGGTTTTAGCACATACACAGTCTCAGCTGCCAAAAGGACAGTTGCAGGACCCACCAGATCATCTGTGTATACATATCAAAGCAGTGAAACATCAAAAATTGAAGTTGGTCAAGGGAATTTGAGGCTTACATTTTCTCCAAATCAAGAAAAAATGGCCAACTATGTTAATACCAGGAACTTGGTTGAGGAACAGATTGAACAGAGGTATTTGTACTACTCAGGATATAATGGAACTGATGATGAAGTGCCACAGAATTCTGGTGCCTACATATTCCGTCCAAATAGCACATATCTCTTAAAGCATGAAAGACAGGTTCCGTTGACTGTTGTGCGTGGACCCTTGCTAGATGAAGTACATCAACAGATAAATCCATGGATATATCAGATTACCAGACTGCACAAGGAAAAAGAGCATGTTGAAGTAGAGTTTATTGTTGGCCCCATACCTATTGATGATGGAATTGGTAAAGAAGTCGTCACTAAGATTTCAACCTCAATGGAAACCAACAAAACATTCTACACAGATTCTAATGGGCGTGATTTTATCAAAAGGATACGTGATTACAGATCAGACTGGGACCTGGAAGAGAACCAACCTATTTCTGGAAACTATTATCCTATTAATCTTGGGATATATGTAAAAGATAATAAGACAGAATTTTCAGTTTTGGTGGATCGATCTGTAGGAGGATCCAGCTTAGCTGATGGAGAAATAGAGCTAATGGTTCACAGGAGATTGCTACTTGATGATTCAAGAGGTGTTGCAGAGGCTTTAAATGAAACAGTCTGTGTTGCTGATGATTGCAGAGGCCTAATAATCCAAGGAAAAGTATACTTTAGAATAGATCCCCTGGGCGAGGGTGCTAAGTGGCGTCGTACAGTTGGCCAGGAAATATATTCTCCGCTTCTCTTGGCCTTTTCTGAACAGGATGGAGATGACTGGGTAAATTCCCATATTCTTACATATTCAGGAATTGATTCTAATTACAGATTACCGGACAACGTTGCAATTATAACCTTGCAGGAACTAGATGGTGGAAAGGTTCTCCTTCGGTTAGCACATCTATATGAGATTGACGAAGACAAGGATCTCTCTGCAATTGCAAGCGTGGAGCTGAAAAAGATGTTCCCAAGGAAAAAGATCGAAGAGGTGAGAGAGATGGCTTTATCTGCGAATCAAGAAAGGACAGAGATGGAGAAGAAAAGACTTAAGTGGAAAGTAGAAGGCCCTTCTGGTTCTGGGGACGAACGTGTTCTTAGGGGAGGGCCTGTTGATCCTAAAGAGCTATCTGTGGAGCTTGCCCCAATGGAAATCCGCACCTTTATCGTTTACTTTGAATCTGAATCTGACATAAAAAGCATTTGA 3057 0.4138 MANQLFLWLFLFGAIFCVQSKFIVYNTSQSIVPDKLNVHLVPHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSLVPSLLADKNRKFIYVEIAFFQRWWREQSEAVKHVVKQLVSSGQLEFINGGMCMHDEAATHYIDMIDQTTMGHRFLKEEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSLFFGRIDYQDRDKRKNEKSLEVIWQGSKSLGSSAQIFAGAFPENYEPPAGFYFEVNDDSPIVQDNIDLFDYNVQDRVNDFVAAAVSQANITRTNHIMWTMGTDFKYQYANSWFRQLDKLIHYVNKDGRVNALYSTPSIYTDAKYASKESWPFKTDDFFPYADRVNAYWTGYFTSRPAFKYYVRLMSGYYLAAKQLELFKGRMSSGSNTDSLADALAIAQHHDGVSGTEKQHVANDYAKRLSIGYKEAEQLVASSLACLVESVSFPGCQNPVTKFQQCPLMNISYCPPSEVDLIQGKNLVIVVYNSLGWWRNEVVRIPVTNEDVIVYDSEGKEIVSQLLPQAEVYASLRNYHVMAYLGETPAKAPKYWLAFTVSVPPLGFSTYTVSAAKRTVAGPTRSSVYTYQSSETSKIEVGQGNLRLTFSPNQEKMANYVNTRNLVEEQIEQRYLYYSGYNGTDDEVPQNSGAYIFRPNSTYLLKHERQVPLTVVRGPLLDEVHQQINPWIYQITRLHKEKEHVEVEFIVGPIPIDDGIGKEVVTKISTSMETNKTFYTDSNGRDFIKRIRDYRSDWDLEENQPISGNYYPINLGIYVKDNKTEFSVLVDRSVGGSSLADGEIELMVHRRLLLDDSRGVAEALNETVCVADDCRGLIIQGKVYFRIDPLGEGAKWRRTVGQEIYSPLLLAFSEQDGDDWVNSHILTYSGIDSNYRLPDNVAIITLQELDGGKVLLRLAHLYEIDEDKDLSAIASVELKKMFPRKKIEEVREMALSANQERTEMEKKRLKWKVEGPSGSGDERVLRGGPVDPKELSVELAPMEIRTFIVYFESESDIKSI 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0455 1018 Pfam Alpha mannosidase middle domain 353 445 IPR015341 GO:0004559|GO:0006013
Lele06g0455 1018 Gene3D - 884 1014 - -
Lele06g0455 1018 SUPERFAMILY Families 57/38 glycoside transferase middle domain 353 450 IPR028995 -
Lele06g0455 1018 FunFam Alpha-mannosidase 315 395 - -
Lele06g0455 1018 Gene3D Glycoside hydrolase family 38, central domain 396 451 IPR037094 GO:0004559|GO:0006013
Lele06g0455 1018 PANTHER ALPHA-MANNOSIDASE 12 1010 - -
Lele06g0455 1018 Pfam Glycosyl hydrolases family 38 C-terminal domain 601 816 IPR011682 GO:0004559|GO:0006013
Lele06g0455 1018 SMART Alpha_mann_mid_2 353 427 IPR015341 GO:0004559|GO:0006013
Lele06g0455 1018 FunFam Alpha-mannosidase 884 1011 - -
Lele06g0455 1018 Gene3D Glycoside hydrolase 38, N terminal domain 36 316 IPR027291 -
Lele06g0455 1018 FunFam Alpha-mannosidase 396 450 - -
Lele06g0455 1018 SUPERFAMILY Galactose mutarotase-like 455 1009 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lele06g0455 1018 Gene3D - 473 598 IPR013780 -
Lele06g0455 1018 CDD GH38N_AMII_LAM_like 36 312 - -
Lele06g0455 1018 FunFam Alpha-mannosidase 36 316 - -
Lele06g0455 1018 FunFam Alpha-mannosidase 598 864 - -
Lele06g0455 1018 SUPERFAMILY Glycoside hydrolase/deacetylase 25 349 IPR011330 GO:0005975
Lele06g0455 1018 Coils Coil 945 965 - -
Lele06g0455 1018 FunFam Alpha-mannosidase 473 598 - -
Lele06g0455 1018 Pfam Glycosyl hydrolases family 38 N-terminal domain 37 348 IPR000602 GO:0004559|GO:0006013
Lele06g0455 1018 Gene3D - 599 864 - -
Lele06g0455 1018 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 898 1006 IPR041147 -
Lele06g0455 1018 Gene3D Glycoside hydrolase family 38, central domain 317 395 IPR037094 GO:0004559|GO:0006013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0455 Lele-ChrLele06 2781211 2792966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0455 4 921 Glycoside Hydrolase AT5G13980 70.716 0.0 1383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0455 06 2781211 2792966 Lele07g0666 07 3799113 3800380 hybridization
Lele06g0455 06 2781211 2792966 Lele08g0468 08 2856161 2870783 hybridization